RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 ZNF710Q8N1W2 664 aa17.94■□□□□ 0.46
PDE1B-207ENST00000550620 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
PDE1B-207ENST00000550620 GPATCH3Q96I76 525 aa17.94■□□□□ 0.46
PDE1B-207ENST00000550620 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
PDE1B-207ENST00000550620 TNRQ92752 1358 aa17.94■□□□□ 0.46
PDE1B-207ENST00000550620 CACNA1FO60840 1977 aa17.94■□□□□ 0.46
PDE1B-207ENST00000550620 C17orf53Q8N3J3 647 aaPredicted RBP17.94■□□□□ 0.46
PDE1B-207ENST00000550620 LARP6Q9BRS8 491 aaKnown RBP17.94■□□□□ 0.46
PDE1B-207ENST00000550620 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
PDE1B-207ENST00000550620 ZSWIM6Q9HCJ5 1215 aa17.94■□□□□ 0.46
PDE1B-207ENST00000550620 LARGE1O95461 756 aa17.93■□□□□ 0.46
PDE1B-207ENST00000550620 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
PDE1B-207ENST00000550620 OS9Q13438 667 aaPredicted RBP17.93■□□□□ 0.46
PDE1B-207ENST00000550620 KCNB2Q92953 911 aa17.93■□□□□ 0.46
PDE1B-207ENST00000550620 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
PDE1B-207ENST00000550620 KRT85P78386 507 aa17.93■□□□□ 0.46
PDE1B-207ENST00000550620 CLASRPQ8N2M8 674 aaKnown RBP17.93■□□□□ 0.46
PDE1B-207ENST00000550620 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
PDE1B-207ENST00000550620 FAM200AQ8TCP9 573 aa17.93■□□□□ 0.46
PDE1B-207ENST00000550620 CRYBG1Q9Y4K1 1723 aa17.92■□□□□ 0.46
PDE1B-207ENST00000550620 VPS37CA5D8V6 355 aaPredicted RBP17.92■□□□□ 0.46
PDE1B-207ENST00000550620 HOXB7P09629 217 aa17.92■□□□□ 0.46
PDE1B-207ENST00000550620 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
PDE1B-207ENST00000550620 UTP14CQ5TAP6 766 aaKnown RBP17.91■□□□□ 0.46
PDE1B-207ENST00000550620 PRPF40BQ6NWY9 871 aaKnown RBP17.91■□□□□ 0.46
PDE1B-207ENST00000550620 DNAAF4Q8WXU2 420 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 ELP1O95163 1332 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 CCDC171Q6TFL3 1326 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 CPA1P15085 419 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 PDCP20941 246 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 MAP3K11Q16584 847 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 ECHDC1Q9NTX5 307 aa17.91■□□□□ 0.46
PDE1B-207ENST00000550620 NBPF7P0C2Y1 421 aaPredicted RBP17.9■□□□□ 0.46
PDE1B-207ENST00000550620 ERC1Q8IUD2 1116 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 NUP62CLQ9H1M0 184 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 KCNF1Q9H3M0 494 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 HIP1O00291 1037 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 PSMA5P28066 241 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 HOXC9P31274 260 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 EVI5LQ96CN4 794 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 DIP2BQ9P265 1576 aa17.9■□□□□ 0.46
PDE1B-207ENST00000550620 AP5Z1O43299 807 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 PTH1RQ03431 593 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 MTX1Q13505 466 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 ADCK5Q3MIX3 580 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 LARP1BQ659C4 914 aaKnown RBP17.89■□□□□ 0.45
PDE1B-207ENST00000550620 TSC1Q92574 1164 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 PYCARDQ9ULZ3 195 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 HDAC5Q9UQL6 1122 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 SPC24Q8NBT2 197 aa17.89■□□□□ 0.45
PDE1B-207ENST00000550620 IFIT2P09913 472 aaKnown RBP17.88■□□□□ 0.45
PDE1B-207ENST00000550620 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
PDE1B-207ENST00000550620 DMTNQ08495 405 aa17.88■□□□□ 0.45
PDE1B-207ENST00000550620 NECTIN1Q15223 517 aa17.88■□□□□ 0.45
PDE1B-207ENST00000550620 ANKRD1Q15327 319 aa17.88■□□□□ 0.45
PDE1B-207ENST00000550620 ME3Q16798 604 aa17.88■□□□□ 0.45
PDE1B-207ENST00000550620 PPP4R3BQ5MIZ7 849 aa17.88■□□□□ 0.45
PDE1B-207ENST00000550620 JARID2Q92833 1246 aaPredicted RBP17.88■□□□□ 0.45
PDE1B-207ENST00000550620 TCHHQ07283 1943 aa17.88■□□□□ 0.45
PDE1B-207ENST00000550620 NLRP6P59044 892 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 PDCL2Q8N4E4 241 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 NWD1Q149M9 1564 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 UBR1Q8IWV7 1749 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 KCNJ4P48050 445 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 TYRO3Q06418 890 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
PDE1B-207ENST00000550620 SCAND2PQ9GZW5 306 aaPredicted RBP17.87■□□□□ 0.45
PDE1B-207ENST00000550620 RIOK3O14730 519 aaKnown RBP17.86■□□□□ 0.45
PDE1B-207ENST00000550620 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
PDE1B-207ENST00000550620 ST3GAL1Q11201 340 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 DDX19AQ9NUU7 478 aaKnown RBP17.86■□□□□ 0.45
PDE1B-207ENST00000550620 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 GOLGA6L4A6NEF3 574 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 CREB3L3Q68CJ9 461 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 CHPF2Q9P2E5 772 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
PDE1B-207ENST00000550620 MRVI1Q9Y6F6 885 aa17.86■□□□□ 0.45
PDE1B-207ENST00000550620 PIK3C2AO00443 1686 aa17.85■□□□□ 0.45
PDE1B-207ENST00000550620 RNF20Q5VTR2 975 aa17.85■□□□□ 0.45
PDE1B-207ENST00000550620 TNMDQ9H2S6 317 aa17.85■□□□□ 0.45
PDE1B-207ENST00000550620 ADGRL3Q9HAR2 1447 aa17.85■□□□□ 0.45
PDE1B-207ENST00000550620 CTIFO43310 598 aaKnown RBP17.84■□□□□ 0.45
PDE1B-207ENST00000550620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.84■□□□□ 0.45
PDE1B-207ENST00000550620 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
PDE1B-207ENST00000550620 ANKRD7Q92527 254 aa17.84■□□□□ 0.45
PDE1B-207ENST00000550620 GTPBP4Q9BZE4 634 aaKnown RBP17.84■□□□□ 0.45
PDE1B-207ENST00000550620 TPCN1Q9ULQ1 816 aa17.84■□□□□ 0.45
PDE1B-207ENST00000550620 ZSCAN20P17040 1043 aaPredicted RBP17.84■□□□□ 0.45
PDE1B-207ENST00000550620 MAP4K1Q92918 833 aa17.84■□□□□ 0.45
PDE1B-207ENST00000550620 NPHP3Q7Z494 1330 aa17.84■□□□□ 0.45
PDE1B-207ENST00000550620 ALDH1L1O75891 902 aa17.83■□□□□ 0.45
PDE1B-207ENST00000550620 PTGS1P23219 599 aa17.83■□□□□ 0.45
PDE1B-207ENST00000550620 CBX1P83916 185 aa17.83■□□□□ 0.45
PDE1B-207ENST00000550620 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.45
PDE1B-207ENST00000550620 ALDH8A1Q9H2A2 487 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms