RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 NEFLP07196 543 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 KIF6Q6ZMV9 814 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
RAB5C-207ENST00000550504 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
RAB5C-207ENST00000550504 COL15A1P39059 1388 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 MS4A1P11836 297 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 TMEM57Q8N5G2 664 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 DNAAF4Q8WXU2 420 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 ABCC4O15439 1325 aa13.06□□□□□ -0.32
RAB5C-207ENST00000550504 A0A087WZG4 1122 aa13.05□□□□□ -0.32
RAB5C-207ENST00000550504 HMGB2P26583 209 aaKnown RBP13.05□□□□□ -0.32
RAB5C-207ENST00000550504 PLBD2Q8NHP8 589 aa13.05□□□□□ -0.32
RAB5C-207ENST00000550504 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
RAB5C-207ENST00000550504 CRBNQ96SW2 442 aa13.05□□□□□ -0.32
RAB5C-207ENST00000550504 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
RAB5C-207ENST00000550504 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
RAB5C-207ENST00000550504 MYD88Q99836 296 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-207ENST00000550504 TFCP2L1Q9NZI6 479 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
RAB5C-207ENST00000550504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
RAB5C-207ENST00000550504 FKBP8Q14318 412 aa13.03□□□□□ -0.32
RAB5C-207ENST00000550504 HLFQ16534 295 aa13.03□□□□□ -0.32
RAB5C-207ENST00000550504 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
RAB5C-207ENST00000550504 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
RAB5C-207ENST00000550504 SRP68Q9UHB9 627 aaKnown RBP13.03□□□□□ -0.32
RAB5C-207ENST00000550504 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 MSH5O43196 834 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 SSFA2P28290 1259 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 RFC4P35249 363 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 CCT4P50991 539 aaKnown RBP13.02□□□□□ -0.33
RAB5C-207ENST00000550504 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 MVPQ14764 893 aaKnown RBP13.02□□□□□ -0.33
RAB5C-207ENST00000550504 BEND3Q5T5X7 828 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
RAB5C-207ENST00000550504 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 ZPR1O75312 459 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 ADRA2BP18089 450 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 SLC15A2Q16348 729 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 CWF19L2Q2TBE0 894 aaKnown RBP13.01□□□□□ -0.33
RAB5C-207ENST00000550504 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
RAB5C-207ENST00000550504 GIGYF2Q6Y7W6 1299 aaKnown RBP13.01□□□□□ -0.33
RAB5C-207ENST00000550504 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 C4AP0C0L4 1744 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
RAB5C-207ENST00000550504 BCORQ6W2J9 1755 aa13□□□□□ -0.33
RAB5C-207ENST00000550504 ATP10DQ9P241 1426 aa13□□□□□ -0.33
RAB5C-207ENST00000550504 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
RAB5C-207ENST00000550504 IGKV5-2P06315 115 aa13□□□□□ -0.33
RAB5C-207ENST00000550504 GPTP24298 496 aa13□□□□□ -0.33
RAB5C-207ENST00000550504 TCIRG1Q13488 830 aa13□□□□□ -0.33
RAB5C-207ENST00000550504 LINS1Q8NG48 757 aa13□□□□□ -0.33
RAB5C-207ENST00000550504 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-207ENST00000550504 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 ZNF652Q9Y2D9 606 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 NUP98P52948 1817 aa12.99□□□□□ -0.33
RAB5C-207ENST00000550504 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
RAB5C-207ENST00000550504 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
RAB5C-207ENST00000550504 NEURL1BA8MQ27 555 aa12.98□□□□□ -0.33
RAB5C-207ENST00000550504 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
RAB5C-207ENST00000550504 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
RAB5C-207ENST00000550504 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
RAB5C-207ENST00000550504 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
RAB5C-207ENST00000550504 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
RAB5C-207ENST00000550504 MEIS3Q99687 375 aa12.97□□□□□ -0.33
RAB5C-207ENST00000550504 ISCA1Q9BUE6 129 aa12.97□□□□□ -0.33
RAB5C-207ENST00000550504 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
RAB5C-207ENST00000550504 UBN2Q6ZU65 1347 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 PSDA5PKW4 1024 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-207ENST00000550504 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 ZBTB7BO15156 539 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-207ENST00000550504 GYS1P13807 737 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 GCKRQ14397 625 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-207ENST00000550504 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 ZNF34Q8IZ26 560 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
RAB5C-207ENST00000550504 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-207ENST00000550504 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
RAB5C-207ENST00000550504 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms