RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 PRKRIP1Q9H875 184 aaPredicted RBP26.16■■□□□ 1.78
GCN1-207ENST00000550471 SENP3-EIF4A1A0A087X0R7 540 aa26.15■■□□□ 1.78
GCN1-207ENST00000550471 SOGA3Q5TF21 947 aa26.15■■□□□ 1.78
GCN1-207ENST00000550471 STYK1Q6J9G0 422 aa26.15■■□□□ 1.78
GCN1-207ENST00000550471 ZNF526Q8TF50 670 aaPredicted RBP26.15■■□□□ 1.78
GCN1-207ENST00000550471 KIF6Q6ZMV9 814 aa26.14■■□□□ 1.78
GCN1-207ENST00000550471 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.77
GCN1-207ENST00000550471 PIP4K2AP48426 406 aaPredicted RBP26.13■■□□□ 1.77
GCN1-207ENST00000550471 ZNF622Q969S3 477 aaKnown RBP eCLIP26.13■■□□□ 1.772e-10■■■□□ 15.4
GCN1-207ENST00000550471 THUMPD2Q9BTF0 503 aaKnown RBP26.13■■□□□ 1.77
GCN1-207ENST00000550471 RNF181Q9P0P0 153 aa26.13■■□□□ 1.77
GCN1-207ENST00000550471 NIP7Q9Y221 180 aaKnown RBP eCLIP26.13■■□□□ 1.77
GCN1-207ENST00000550471 LMNB1P20700 586 aa26.12■■□□□ 1.77
GCN1-207ENST00000550471 MASTLQ96GX5 879 aa26.12■■□□□ 1.77
GCN1-207ENST00000550471 NYXQ9GZU5 481 aa26.12■■□□□ 1.77
GCN1-207ENST00000550471 SRGNP10124 158 aa26.1■■□□□ 1.77
GCN1-207ENST00000550471 MAP3K15Q6ZN16 1313 aa26.1■■□□□ 1.77
GCN1-207ENST00000550471 KIF3CO14782 793 aa26.09■■□□□ 1.77
GCN1-207ENST00000550471 RRP7AQ9Y3A4 280 aaKnown RBP26.09■■□□□ 1.77
GCN1-207ENST00000550471 GTF2E1P29083 439 aaPredicted RBP26.08■■□□□ 1.77
GCN1-207ENST00000550471 KLRG2A4D1S0 409 aaPredicted RBP26.07■■□□□ 1.76
GCN1-207ENST00000550471 TOMM70O94826 608 aa26.07■■□□□ 1.76
GCN1-207ENST00000550471 NPR1P16066 1061 aa26.07■■□□□ 1.76
GCN1-207ENST00000550471 ADAMTS8Q9UP79 889 aa26.07■■□□□ 1.76
GCN1-207ENST00000550471 IBTKQ9P2D0 1353 aaPredicted RBP26.07■■□□□ 1.76
GCN1-207ENST00000550471 LTBP3Q9NS15 1303 aa26.06■■□□□ 1.76
GCN1-207ENST00000550471 ANKRD31Q8N7Z5 1873 aa26.06■■□□□ 1.76
GCN1-207ENST00000550471 CHL1O00533 1208 aa26.05■■□□□ 1.76
GCN1-207ENST00000550471 CALD1Q05682 793 aaKnown RBP26.05■■□□□ 1.76
GCN1-207ENST00000550471 HOXB7P09629 217 aa26.04■■□□□ 1.76
GCN1-207ENST00000550471 MYL6BP14649 208 aa26.04■■□□□ 1.76
GCN1-207ENST00000550471 NEUROD2Q15784 382 aa26.04■■□□□ 1.76
GCN1-207ENST00000550471 CCDC146Q8IYE0 955 aa26.04■■□□□ 1.76
GCN1-207ENST00000550471 C16orf71Q8IYS4 520 aaPredicted RBP26.04■■□□□ 1.76
GCN1-207ENST00000550471 ALDH1B1P30837 517 aa26.03■■□□□ 1.76
GCN1-207ENST00000550471 HLFQ16534 295 aa26.03■■□□□ 1.76
GCN1-207ENST00000550471 NGEFQ8N5V2 710 aa26.03■■□□□ 1.76
GCN1-207ENST00000550471 C21orf2O43822 256 aa26.02■■□□□ 1.76
GCN1-207ENST00000550471 HSPA6P17066 643 aa26.02■■□□□ 1.76
GCN1-207ENST00000550471 PARP10Q53GL7 1025 aa26.02■■□□□ 1.76
GCN1-207ENST00000550471 PRPF40BQ6NWY9 871 aaKnown RBP26.02■■□□□ 1.76
GCN1-207ENST00000550471 GIGYF2Q6Y7W6 1299 aaKnown RBP26.02■■□□□ 1.76
GCN1-207ENST00000550471 SBF1O95248 1867 aa26.02■■□□□ 1.76
GCN1-207ENST00000550471 RASSF7Q02833 373 aa26.01■■□□□ 1.75
GCN1-207ENST00000550471 HSP90AB3PQ58FF7 597 aa26.01■■□□□ 1.75
GCN1-207ENST00000550471 CCDC24Q8N4L8 307 aa26.01■■□□□ 1.75
GCN1-207ENST00000550471 CHMP4AQ9BY43 222 aa26.01■■□□□ 1.75
GCN1-207ENST00000550471 TAOK3Q9H2K8 898 aa26.01■■□□□ 1.75
GCN1-207ENST00000550471 TRIM35Q9UPQ4 493 aa26.01■■□□□ 1.75
GCN1-207ENST00000550471 RIC1Q4ADV7 1423 aa26■■□□□ 1.75
GCN1-207ENST00000550471 NFKBIEO00221 500 aa26■■□□□ 1.75
GCN1-207ENST00000550471 EIF2S2P20042 333 aaKnown RBP26■■□□□ 1.75
GCN1-207ENST00000550471 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
GCN1-207ENST00000550471 PPP1R42Q7Z4L9 355 aa26■■□□□ 1.75
GCN1-207ENST00000550471 RBM46Q8TBY0 533 aaKnown RBP26■■□□□ 1.75
GCN1-207ENST00000550471 CFAP44Q96MT7 982 aa26■■□□□ 1.75
GCN1-207ENST00000550471 RNF123Q5XPI4 1314 aa25.99■■□□□ 1.75
GCN1-207ENST00000550471 GLTPD2A6NH11 291 aa25.99■■□□□ 1.75
GCN1-207ENST00000550471 TTLL7Q6ZT98 887 aa25.99■■□□□ 1.75
GCN1-207ENST00000550471 GRIPAP1Q4V328 841 aa25.98■■□□□ 1.75
GCN1-207ENST00000550471 CCDC93Q567U6 631 aa25.98■■□□□ 1.75
GCN1-207ENST00000550471 ZNF34Q8IZ26 560 aa25.98■■□□□ 1.75
GCN1-207ENST00000550471 NMRK2Q9NPI5 230 aa25.98■■□□□ 1.75
GCN1-207ENST00000550471 COL11A2P13942 1736 aaPredicted RBP25.97■■□□□ 1.75
GCN1-207ENST00000550471 PDIA6Q15084 440 aa25.97■■□□□ 1.75
GCN1-207ENST00000550471 CC2D2BQ6DHV5 1058 aa25.97■■□□□ 1.75
GCN1-207ENST00000550471 RTKN2Q8IZC4 609 aa25.97■■□□□ 1.75
GCN1-207ENST00000550471 ZBTB3Q9H5J0 574 aa25.97■■□□□ 1.75
GCN1-207ENST00000550471 DDX21Q9NR30 783 aaKnown RBP eCLIP25.97■■□□□ 1.75
GCN1-207ENST00000550471 ARFGEF2Q9Y6D5 1785 aa25.97■■□□□ 1.75
GCN1-207ENST00000550471 FSTL1Q12841 308 aa25.96■■□□□ 1.75
GCN1-207ENST00000550471 CRY2Q49AN0 593 aa25.96■■□□□ 1.75
GCN1-207ENST00000550471 FAM177BA6PVY3 158 aa25.95■■□□□ 1.74
GCN1-207ENST00000550471 ERFEQ4G0M1 354 aa25.95■■□□□ 1.74
GCN1-207ENST00000550471 LRP10Q7Z4F1 713 aa25.95■■□□□ 1.74
GCN1-207ENST00000550471 LAS1LQ9Y4W2 734 aaKnown RBP25.95■■□□□ 1.74
GCN1-207ENST00000550471 TNRC6CQ9HCJ0 1690 aaKnown RBP25.95■■□□□ 1.74
GCN1-207ENST00000550471 NUP98P52948 1817 aa25.95■■□□□ 1.74
GCN1-207ENST00000550471 VEGFAP15692 232 aaPredicted RBP25.94■■□□□ 1.74
GCN1-207ENST00000550471 C7orf43Q8WVR3 580 aa25.94■■□□□ 1.74
GCN1-207ENST00000550471 APLP1P51693 650 aa25.93■■□□□ 1.74
GCN1-207ENST00000550471 GNAI1P63096 354 aa25.93■■□□□ 1.74
GCN1-207ENST00000550471 IFT57Q9NWB7 429 aa25.93■■□□□ 1.74
GCN1-207ENST00000550471 ZNF219Q9P2Y4 722 aaPredicted RBP25.93■■□□□ 1.74
GCN1-207ENST00000550471 FER1L6Q2WGJ9 1857 aa25.93■■□□□ 1.74
GCN1-207ENST00000550471 HOXA10P31260 410 aaPredicted RBP25.92■■□□□ 1.74
GCN1-207ENST00000550471 RPGRQ92834 1020 aaKnown RBP25.92■■□□□ 1.74
GCN1-207ENST00000550471 RRAGCQ9HB90 399 aa25.92■■□□□ 1.74
GCN1-207ENST00000550471 DBF4Q9UBU7 674 aaPredicted RBP25.92■■□□□ 1.74
GCN1-207ENST00000550471 GPTP24298 496 aa25.91■■□□□ 1.74
GCN1-207ENST00000550471 FKBP4Q02790 459 aaKnown RBP eCLIP25.91■■□□□ 1.74
GCN1-207ENST00000550471 HDGFL1Q5TGJ6 251 aa25.91■■□□□ 1.74
GCN1-207ENST00000550471 SUSD4Q5VX71 490 aa25.91■■□□□ 1.74
GCN1-207ENST00000550471 COPS6Q7L5N1 327 aa25.91■■□□□ 1.74
GCN1-207ENST00000550471 UTP14AQ9BVJ6 771 aaKnown RBP25.91■■□□□ 1.74
GCN1-207ENST00000550471 SLX4Q8IY92 1834 aa25.91■■□□□ 1.74
GCN1-207ENST00000550471 UBN2Q6ZU65 1347 aa25.9■■□□□ 1.74
GCN1-207ENST00000550471 APAF1O14727 1248 aa25.9■■□□□ 1.74
GCN1-207ENST00000550471 PRELPP51888 382 aa25.9■■□□□ 1.74
GCN1-207ENST00000550471 RBM17Q96I25 401 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms