RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 NUTM2AQ8IVF1 878 aaPredicted RBP20.08■□□□□ 0.81
ATXN2-219ENST00000550104 DDX21Q9NR30 783 aaKnown RBP eCLIP20.08■□□□□ 0.81
ATXN2-219ENST00000550104 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.81
ATXN2-219ENST00000550104 SASS6Q6UVJ0 657 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 DDX11Q96FC9 970 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 KRT85P78386 507 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 ZNF790Q6PG37 636 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 ZCRB1Q8TBF4 217 aaKnown RBP20.07■□□□□ 0.8
ATXN2-219ENST00000550104 HOXB7P09629 217 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 KRT32Q14532 448 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 ANAPC15P60006 121 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 CCDC73Q6ZRK6 1079 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 PANK2Q9BZ23 570 aa20.07■□□□□ 0.8
ATXN2-219ENST00000550104 BICC1Q9H694 974 aaKnown RBP20.07■□□□□ 0.8
ATXN2-219ENST00000550104 RBM27Q9P2N5 1060 aaKnown RBP20.07■□□□□ 0.8
ATXN2-219ENST00000550104 CPSF1Q10570 1443 aaKnown RBP20.07■□□□□ 0.8
ATXN2-219ENST00000550104 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
ATXN2-219ENST00000550104 CDK11BP21127 795 aaKnown RBP20.06■□□□□ 0.8
ATXN2-219ENST00000550104 TRIM29Q14134 588 aa20.06■□□□□ 0.8
ATXN2-219ENST00000550104 A0A0U1RQG5 324 aaPredicted RBP20.06■□□□□ 0.8
ATXN2-219ENST00000550104 IFIT1P09914 478 aaKnown RBP20.06■□□□□ 0.8
ATXN2-219ENST00000550104 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■□□□□ 10.4
ATXN2-219ENST00000550104 KLHL40Q2TBA0 621 aa20.06■□□□□ 0.8
ATXN2-219ENST00000550104 TCEANC2Q96MN5 208 aa20.06■□□□□ 0.8
ATXN2-219ENST00000550104 CWC25Q9NXE8 425 aaPredicted RBP20.06■□□□□ 0.8
ATXN2-219ENST00000550104 GPTP24298 496 aa20.06■□□□□ 0.8
ATXN2-219ENST00000550104 TPM4P67936 248 aa20.06■□□□□ 0.8
ATXN2-219ENST00000550104 IQSEC2Q5JU85 1478 aa20.05■□□□□ 0.8
ATXN2-219ENST00000550104 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
ATXN2-219ENST00000550104 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
ATXN2-219ENST00000550104 ZC3H13Q5T200 1668 aaKnown RBP20.04■□□□□ 0.8
ATXN2-219ENST00000550104 NEURL4Q96JN8 1562 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 GOLIM4O00461 696 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 AKAP17AQ02040 695 aaKnown RBP20.04■□□□□ 0.8
ATXN2-219ENST00000550104 DDX46Q7L014 1031 aaKnown RBP20.04■□□□□ 0.8
ATXN2-219ENST00000550104 PTCH1Q13635 1447 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 KLHDC4Q8TBB5 520 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 DCAF5Q96JK2 942 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 ESPNB1AK53 854 aa20.04■□□□□ 0.8
ATXN2-219ENST00000550104 SH2B1Q9NRF2 756 aaPredicted RBP20.04■□□□□ 0.8
ATXN2-219ENST00000550104 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■■■□□ 15.9
ATXN2-219ENST00000550104 LETM1O95202 739 aaPredicted RBP20.03■□□□□ 0.8
ATXN2-219ENST00000550104 SNRKQ9NRH2 765 aa20.03■□□□□ 0.8
ATXN2-219ENST00000550104 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.8
ATXN2-219ENST00000550104 RBM8AQ9Y5S9 174 aaKnown RBP20.02■□□□□ 0.8
ATXN2-219ENST00000550104 PPLO60437 1756 aa20.02■□□□□ 0.8
ATXN2-219ENST00000550104 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
ATXN2-219ENST00000550104 IDH1O75874 414 aaKnown RBP20.02■□□□□ 0.79
ATXN2-219ENST00000550104 NECAB1Q8N987 351 aa20.02■□□□□ 0.79
ATXN2-219ENST00000550104 STX6O43752 255 aa20.01■□□□□ 0.79
ATXN2-219ENST00000550104 GJB2P29033 226 aa20.01■□□□□ 0.79
ATXN2-219ENST00000550104 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
ATXN2-219ENST00000550104 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
ATXN2-219ENST00000550104 CCDC39Q9UFE4 941 aa20.01■□□□□ 0.79
ATXN2-219ENST00000550104 GIGYF1O75420 1035 aaPredicted RBP20.01■□□□□ 0.79
ATXN2-219ENST00000550104 RRP12Q5JTH9 1297 aaKnown RBP20.01■□□□□ 0.79
ATXN2-219ENST00000550104 SPATA32Q96LK8 384 aa20■□□□□ 0.79
ATXN2-219ENST00000550104 SDF4Q9BRK5 362 aa20■□□□□ 0.79
ATXN2-219ENST00000550104 ERICH2A1L162 156 aa20■□□□□ 0.79
ATXN2-219ENST00000550104 CPA1P15085 419 aa20■□□□□ 0.79
ATXN2-219ENST00000550104 NMIQ13287 307 aaPredicted RBP20■□□□□ 0.79
ATXN2-219ENST00000550104 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
ATXN2-219ENST00000550104 ADAMTS2O95450 1211 aa20■□□□□ 0.79
ATXN2-219ENST00000550104 SSH3Q8TE77 659 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 SLC52A2Q9HAB3 445 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 CD2BP2O95400 341 aaKnown RBP19.99■□□□□ 0.79
ATXN2-219ENST00000550104 SUCLG2Q96I99 432 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 MYO3AQ8NEV4 1616 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 AKAP2Q9Y2D5 859 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 CPS1P31327 1500 aa19.99■□□□□ 0.79
ATXN2-219ENST00000550104 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
ATXN2-219ENST00000550104 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
ATXN2-219ENST00000550104 ZSCAN23Q3MJ62 389 aa19.98■□□□□ 0.79
ATXN2-219ENST00000550104 AK2P54819 239 aa19.98■□□□□ 0.79
ATXN2-219ENST00000550104 CCDC34Q96HJ3 373 aa19.98■□□□□ 0.79
ATXN2-219ENST00000550104 CTNNA3Q9UI47 895 aa19.98■□□□□ 0.79
ATXN2-219ENST00000550104 U3KPZ7 1027 aaPredicted RBP19.98■□□□□ 0.79
ATXN2-219ENST00000550104 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
ATXN2-219ENST00000550104 DHX16O60231 1041 aaKnown RBP19.97■□□□□ 0.79
ATXN2-219ENST00000550104 BEND3Q5T5X7 828 aa19.97■□□□□ 0.79
ATXN2-219ENST00000550104 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
ATXN2-219ENST00000550104 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
ATXN2-219ENST00000550104 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.97■□□□□ 0.79
ATXN2-219ENST00000550104 RASSF8Q8NHQ8 419 aa19.97■□□□□ 0.79
ATXN2-219ENST00000550104 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
ATXN2-219ENST00000550104 KINO60870 393 aaKnown RBP19.96■□□□□ 0.79
ATXN2-219ENST00000550104 PPFIA3O75145 1194 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 CCDC192P0DO97 292 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 TFCP2Q12800 502 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 AGLP35573 1532 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 ANTXR1Q9H6X2 564 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 PODXL2Q9NZ53 605 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 R3HCC1Q9Y3T6 440 aaKnown RBP19.96■□□□□ 0.79
ATXN2-219ENST00000550104 IL2RBP14784 551 aa19.96■□□□□ 0.79
ATXN2-219ENST00000550104 ME1P48163 572 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms