RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 EXOSC9Q06265 439 aaKnown RBP19.24■□□□□ 0.67
GPN3-206ENST00000549963 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
GPN3-206ENST00000549963 NFIXQ14938 502 aa19.24■□□□□ 0.67
GPN3-206ENST00000549963 COPS6Q7L5N1 327 aa19.24■□□□□ 0.67
GPN3-206ENST00000549963 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
GPN3-206ENST00000549963 SYT17Q9BSW7 474 aa19.24■□□□□ 0.67
GPN3-206ENST00000549963 MAP3K15Q6ZN16 1313 aa19.24■□□□□ 0.67
GPN3-206ENST00000549963 NPHP1O15259 732 aa19.23■□□□□ 0.67
GPN3-206ENST00000549963 ANXA1P04083 346 aa19.23■□□□□ 0.67
GPN3-206ENST00000549963 TBC1D9BQ66K14 1250 aa19.23■□□□□ 0.67
GPN3-206ENST00000549963 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
GPN3-206ENST00000549963 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
GPN3-206ENST00000549963 PROSER3Q2NL68 480 aa19.22■□□□□ 0.67
GPN3-206ENST00000549963 TTLL7Q6ZT98 887 aa19.22■□□□□ 0.67
GPN3-206ENST00000549963 XAGE3Q8WTP9 111 aa19.22■□□□□ 0.67
GPN3-206ENST00000549963 POLRMTO00411 1230 aaKnown RBP19.21■□□□□ 0.67
GPN3-206ENST00000549963 SERPINB2P05120 415 aa19.21■□□□□ 0.67
GPN3-206ENST00000549963 ZBTB3Q9H5J0 574 aa19.21■□□□□ 0.67
GPN3-206ENST00000549963 NIP7Q9Y221 180 aaKnown RBP eCLIP19.21■□□□□ 0.67
GPN3-206ENST00000549963 CACNA1FO60840 1977 aa19.21■□□□□ 0.67
GPN3-206ENST00000549963 SCN7AQ01118 1682 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 BCORQ6W2J9 1755 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 VAMP4O75379 141 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 DDX58O95786 925 aaKnown RBP19.2■□□□□ 0.66
GPN3-206ENST00000549963 HSP90AB3PQ58FF7 597 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 GIGYF2Q6Y7W6 1299 aaKnown RBP19.2■□□□□ 0.66
GPN3-206ENST00000549963 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 NUP98P52948 1817 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 SRCAPQ6ZRS2 3230 aa19.2■□□□□ 0.66
GPN3-206ENST00000549963 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
GPN3-206ENST00000549963 DDR1Q08345 913 aa19.19■□□□□ 0.66
GPN3-206ENST00000549963 HLFQ16534 295 aa19.19■□□□□ 0.66
GPN3-206ENST00000549963 LRP10Q7Z4F1 713 aa19.19■□□□□ 0.66
GPN3-206ENST00000549963 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
GPN3-206ENST00000549963 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
GPN3-206ENST00000549963 TPTE2Q6XPS3 522 aa19.18■□□□□ 0.66
GPN3-206ENST00000549963 RIC3Q7Z5B4 369 aa19.18■□□□□ 0.66
GPN3-206ENST00000549963 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
GPN3-206ENST00000549963 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
GPN3-206ENST00000549963 TGFB2P61812 414 aa19.17■□□□□ 0.66
GPN3-206ENST00000549963 CDCA7LQ96GN5 454 aa19.17■□□□□ 0.66
GPN3-206ENST00000549963 NYXQ9GZU5 481 aa19.17■□□□□ 0.66
GPN3-206ENST00000549963 ST5P78524 1137 aa19.16■□□□□ 0.66
GPN3-206ENST00000549963 CNBD1Q8NA66 436 aa19.16■□□□□ 0.66
GPN3-206ENST00000549963 PHAXQ9H814 394 aaKnown RBP19.16■□□□□ 0.66
GPN3-206ENST00000549963 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
GPN3-206ENST00000549963 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
GPN3-206ENST00000549963 PARP10Q53GL7 1025 aa19.15■□□□□ 0.66
GPN3-206ENST00000549963 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
GPN3-206ENST00000549963 ZNF428Q96B54 188 aa19.15■□□□□ 0.66
GPN3-206ENST00000549963 CT47B1P0C2W7 299 aaPredicted RBP19.14■□□□□ 0.65
GPN3-206ENST00000549963 TCIRG1Q13488 830 aa19.14■□□□□ 0.65
GPN3-206ENST00000549963 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
GPN3-206ENST00000549963 PDZRN3Q9UPQ7 1066 aa19.14■□□□□ 0.65
GPN3-206ENST00000549963 FAM177BA6PVY3 158 aa19.13■□□□□ 0.65
GPN3-206ENST00000549963 GPTP24298 496 aa19.13■□□□□ 0.65
GPN3-206ENST00000549963 PDE6BP35913 854 aa19.13■□□□□ 0.65
GPN3-206ENST00000549963 ZNF34Q8IZ26 560 aa19.13■□□□□ 0.65
GPN3-206ENST00000549963 NLGN2Q8NFZ4 835 aa19.13■□□□□ 0.65
GPN3-206ENST00000549963 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
GPN3-206ENST00000549963 KIF13BQ9NQT8 1826 aa19.12■□□□□ 0.65
GPN3-206ENST00000549963 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
GPN3-206ENST00000549963 BRIP1Q9BX63 1249 aa19.12■□□□□ 0.65
GPN3-206ENST00000549963 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
GPN3-206ENST00000549963 C10orf71Q711Q0 1435 aa19.11■□□□□ 0.65
GPN3-206ENST00000549963 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
GPN3-206ENST00000549963 GPR162Q16538 588 aa19.11■□□□□ 0.65
GPN3-206ENST00000549963 KSR2Q6VAB6 950 aa19.11■□□□□ 0.65
GPN3-206ENST00000549963 PELP1Q8IZL8 1130 aaKnown RBP19.11■□□□□ 0.65
GPN3-206ENST00000549963 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
GPN3-206ENST00000549963 H0YIN7 160 aa19.1■□□□□ 0.65
GPN3-206ENST00000549963 NEXNQ0ZGT2 675 aa19.1■□□□□ 0.65
GPN3-206ENST00000549963 FLIIQ13045 1269 aa19.1■□□□□ 0.65
GPN3-206ENST00000549963 FKBP5Q13451 457 aaPredicted RBP19.1■□□□□ 0.65
GPN3-206ENST00000549963 UTP14AQ9BVJ6 771 aaKnown RBP19.1■□□□□ 0.65
GPN3-206ENST00000549963 PIM2Q9P1W9 311 aa19.09■□□□□ 0.65
GPN3-206ENST00000549963 PI4KAP2A4QPH2 592 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 DPEP1P16444 411 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 SUSD4Q5VX71 490 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 PI4KAP1Q8N8J0 262 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 METTL22Q9BUU2 404 aaPredicted RBP19.08■□□□□ 0.64
GPN3-206ENST00000549963 MAP3K2Q9Y2U5 619 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 ANKRD36CQ5JPF3 1778 aa19.08■□□□□ 0.64
GPN3-206ENST00000549963 RNF123Q5XPI4 1314 aa19.07■□□□□ 0.64
GPN3-206ENST00000549963 TRIM28Q13263 835 aaKnown RBP19.07■□□□□ 0.64
GPN3-206ENST00000549963 G2E3Q7L622 706 aa19.07■□□□□ 0.64
GPN3-206ENST00000549963 NLRP10Q86W26 655 aa19.07■□□□□ 0.64
GPN3-206ENST00000549963 C2CD5Q86YS7 1000 aa19.07■□□□□ 0.64
GPN3-206ENST00000549963 MYD88Q99836 296 aa19.07■□□□□ 0.64
GPN3-206ENST00000549963 TRMT112Q9UI30 125 aaKnown RBP19.07■□□□□ 0.64
GPN3-206ENST00000549963 IBTKQ9P2D0 1353 aaPredicted RBP19.06■□□□□ 0.64
GPN3-206ENST00000549963 N4BP2Q86UW6 1770 aaPredicted RBP19.06■□□□□ 0.64
GPN3-206ENST00000549963 UBN2Q6ZU65 1347 aa19.06■□□□□ 0.64
GPN3-206ENST00000549963 ATP5J2-PTCD1G3V325 749 aa19.06■□□□□ 0.64
GPN3-206ENST00000549963 GRIN3BO60391 1043 aa19.06■□□□□ 0.64
GPN3-206ENST00000549963 HSP90B1P14625 803 aaKnown RBP19.06■□□□□ 0.64
GPN3-206ENST00000549963 CCDC24Q8N4L8 307 aa19.06■□□□□ 0.64
GPN3-206ENST00000549963 ISCA1Q9BUE6 129 aa19.06■□□□□ 0.64
GPN3-206ENST00000549963 ARFGEF2Q9Y6D5 1785 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms