RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 EIF2S2P20042 333 aaKnown RBP15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 LSG1Q9H089 658 aaKnown RBP15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
CALCOCO1-217ENST00000549935 AK2P54819 239 aa15.27■□□□□ 0.04
CALCOCO1-217ENST00000549935 SYCP1Q15431 976 aa15.27■□□□□ 0.04
CALCOCO1-217ENST00000549935 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
CALCOCO1-217ENST00000549935 PI4K2BQ8TCG2 481 aa15.27■□□□□ 0.04
CALCOCO1-217ENST00000549935 KCNF1Q9H3M0 494 aa15.27■□□□□ 0.04
CALCOCO1-217ENST00000549935 SMC3Q9UQE7 1217 aa15.27■□□□□ 0.04
CALCOCO1-217ENST00000549935 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.03
CALCOCO1-217ENST00000549935 PPP4R3BQ5MIZ7 849 aa15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 CRYBG1Q9Y4K1 1723 aa15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 POLA2Q14181 598 aa15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 C17orf53Q8N3J3 647 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 TSC1Q92574 1164 aa15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 ZSCAN31Q96LW9 406 aaPredicted RBP15.26■□□□□ 0.03
CALCOCO1-217ENST00000549935 SRGAP3O43295 1099 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 CCDC192P0DO97 292 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 THEMISQ8N1K5 641 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 KCNB2Q92953 911 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 MTMR6Q9Y217 621 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 AP5Z1O43299 807 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 ATP2B3Q16720 1220 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 GIMAP6Q6P9H5 292 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 MPNDQ8N594 471 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 FEZ1Q99689 392 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 ARID3AQ99856 593 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 TM6SF1Q9BZW5 370 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 HYPKQ9NX55 129 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
CALCOCO1-217ENST00000549935 VPS53Q5VIR6 699 aa15.24■□□□□ 0.03
CALCOCO1-217ENST00000549935 CNTROBQ8N137 903 aa15.24■□□□□ 0.03
CALCOCO1-217ENST00000549935 LGR6Q9HBX8 967 aa15.24■□□□□ 0.03
CALCOCO1-217ENST00000549935 PYCARDQ9ULZ3 195 aa15.24■□□□□ 0.03
CALCOCO1-217ENST00000549935 CCDC171Q6TFL3 1326 aa15.24■□□□□ 0.03
CALCOCO1-217ENST00000549935 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 FIBPO43427 364 aa15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 RASEFQ8IZ41 740 aa15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 FAM200AQ8TCP9 573 aa15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 CEMIPQ8WUJ3 1361 aa15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 ELP1O95163 1332 aa15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 EIF4A1P60842 406 aaKnown RBP15.23■□□□□ 0.03
CALCOCO1-217ENST00000549935 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 LTN1O94822 1766 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 ANXA1P04083 346 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 CBX1P83916 185 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 KIF1BPQ96EK5 621 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 KCNQ3O43525 872 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 DNAAF4Q8WXU2 420 aa15.22■□□□□ 0.03
CALCOCO1-217ENST00000549935 USP54Q70EL1 1684 aa15.21■□□□□ 0.03
CALCOCO1-217ENST00000549935 GJB2P29033 226 aa15.21■□□□□ 0.03
CALCOCO1-217ENST00000549935 DNM1Q05193 864 aaKnown RBP15.21■□□□□ 0.03
CALCOCO1-217ENST00000549935 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
CALCOCO1-217ENST00000549935 ZSWIM6Q9HCJ5 1215 aa15.21■□□□□ 0.03
CALCOCO1-217ENST00000549935 TTC41PQ6P2S7 1318 aa15.21■□□□□ 0.03
CALCOCO1-217ENST00000549935 IP6K1Q92551 441 aa15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 ZHX1Q9UKY1 873 aaPredicted RBP15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 HSP90AB4PQ58FF6 505 aa15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 RBM33Q96EV2 1170 aaKnown RBP15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
CALCOCO1-217ENST00000549935 OS9Q13438 667 aaPredicted RBP15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 CWC27Q6UX04 472 aaKnown RBP15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 RBM43Q6ZSC3 357 aaKnown RBP15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 LARGE1O95461 756 aa15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 CASTP20810 708 aaKnown RBP15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 TEFQ10587 303 aa15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 PDRG1Q9NUG6 133 aa15.19■□□□□ 0.02
CALCOCO1-217ENST00000549935 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 ADGRL3Q9HAR2 1447 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 SMTNL1A8MU46 457 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 GLRX3O76003 335 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 HOXB7P09629 217 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 LRRC59Q96AG4 307 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 LARP6Q9BRS8 491 aaKnown RBP15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 SPG7Q9UQ90 795 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 CYP46A1Q9Y6A2 500 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 MRVI1Q9Y6F6 885 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 FER1L4A9Z1Z3 1794 aa15.18■□□□□ 0.02
CALCOCO1-217ENST00000549935 CHD2O14647 1828 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms