RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 CAVIN2O95810 425 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 PPIP5K1Q6PFW1 1433 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 CARD14Q9BXL6 1004 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 ZHX3Q9H4I2 956 aa13.11□□□□□ -0.31
RPH3A-217ENST00000549913 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 ESYT1Q9BSJ8 1104 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
RPH3A-217ENST00000549913 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 ANXA1P04083 346 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
RPH3A-217ENST00000549913 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
RPH3A-217ENST00000549913 GSDMDP57764 484 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 CAVIN4Q5BKX8 364 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 HMG20BQ9P0W2 317 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 ADAMTS12P58397 1594 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
RPH3A-217ENST00000549913 STX1AQ16623 288 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 ANKRD18BA2A2Z9 1011 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
RPH3A-217ENST00000549913 PZPP20742 1482 aa13.1□□□□□ -0.31
RPH3A-217ENST00000549913 GOLGA6L10A6NI86 522 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
RPH3A-217ENST00000549913 SYCP1Q15431 976 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 CCDC102AQ96A19 550 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 GOLIM4O00461 696 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 VAMP4O75379 141 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
RPH3A-217ENST00000549913 SLC5A1P13866 664 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
RPH3A-217ENST00000549913 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
RPH3A-217ENST00000549913 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
RPH3A-217ENST00000549913 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
RPH3A-217ENST00000549913 COL17A1Q9UMD9 1497 aaPredicted RBP13.08□□□□□ -0.31
RPH3A-217ENST00000549913 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
RPH3A-217ENST00000549913 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
RPH3A-217ENST00000549913 ZKSCAN5Q9Y2L8 839 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 WDR7Q9Y4E6 1490 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 ERLIN2O94905 339 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
RPH3A-217ENST00000549913 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 CTCFLQ8NI51 663 aaPredicted RBP13.08□□□□□ -0.32
RPH3A-217ENST00000549913 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
RPH3A-217ENST00000549913 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 KIAA0754O94854 1291 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 CASQ1P31415 396 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
RPH3A-217ENST00000549913 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
RPH3A-217ENST00000549913 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 NOLC1Q14978 699 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPH3A-217ENST00000549913 CCDC148Q8NFR7 591 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 HS1BP3Q53T59 392 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 KIAA1328Q86T90 577 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 ABCC10Q5T3U5 1492 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 KIF5CO60282 957 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
RPH3A-217ENST00000549913 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
RPH3A-217ENST00000549913 ZSCAN16Q9H4T2 348 aaPredicted RBP13.07□□□□□ -0.32
RPH3A-217ENST00000549913 PAXBP1Q9Y5B6 917 aa13.07□□□□□ -0.32
RPH3A-217ENST00000549913 ZFYVE9O95405 1425 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 GOLGA8AA7E2F4 631 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 GPTP24298 496 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 FAM193AP78312 1265 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 ZSCAN29Q8IWY8 852 aaPredicted RBP13.06□□□□□ -0.32
RPH3A-217ENST00000549913 ZNF830Q96NB3 372 aaPredicted RBP13.06□□□□□ -0.32
RPH3A-217ENST00000549913 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
RPH3A-217ENST00000549913 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
RPH3A-217ENST00000549913 USP5P45974 858 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms