RNA–Protein interactions for RNA: ENST00000549644.1

ERBB3-211, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 306 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-211ENST00000549644 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
ERBB3-211ENST00000549644 BICDL1Q6ZP65 573 aa11.38□□□□□ -0.59
ERBB3-211ENST00000549644 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
ERBB3-211ENST00000549644 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
ERBB3-211ENST00000549644 NYXQ9GZU5 481 aa11.38□□□□□ -0.59
ERBB3-211ENST00000549644 ATP10DQ9P241 1426 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 PRAMEF22A3QJZ6 481 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 ANP32CO43423 234 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 SOGA3Q5TF21 947 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 PRR5LQ6MZQ0 368 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 NBPF5PQ86XG9 351 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-211ENST00000549644 C2CD5Q86YS7 1000 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
ERBB3-211ENST00000549644 IBTKQ9P2D0 1353 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-211ENST00000549644 NUP98P52948 1817 aa11.37□□□□□ -0.59
ERBB3-211ENST00000549644 MAP3K15Q6ZN16 1313 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 CHRNA5P30532 468 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 NEUROD2Q15784 382 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 CCDC146Q8IYE0 955 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 CNKSR1Q969H4 720 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 GPBP1L1Q9HC44 474 aaPredicted RBP11.36□□□□□ -0.59
ERBB3-211ENST00000549644 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
ERBB3-211ENST00000549644 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
ERBB3-211ENST00000549644 GNAI1P63096 354 aa11.35□□□□□ -0.59
ERBB3-211ENST00000549644 HSP90AB3PQ58FF7 597 aa11.35□□□□□ -0.59
ERBB3-211ENST00000549644 MASTLQ96GX5 879 aa11.35□□□□□ -0.59
ERBB3-211ENST00000549644 RRP7AQ9Y3A4 280 aaKnown RBP11.35□□□□□ -0.59
ERBB3-211ENST00000549644 SBF1O95248 1867 aa11.35□□□□□ -0.59
ERBB3-211ENST00000549644 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
ERBB3-211ENST00000549644 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
ERBB3-211ENST00000549644 KLRG2A4D1S0 409 aaPredicted RBP11.34□□□□□ -0.59
ERBB3-211ENST00000549644 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
ERBB3-211ENST00000549644 CCDC27Q2M243 656 aa11.34□□□□□ -0.59
ERBB3-211ENST00000549644 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
ERBB3-211ENST00000549644 GIGYF2Q6Y7W6 1299 aaKnown RBP11.34□□□□□ -0.59
ERBB3-211ENST00000549644 NGEFQ8N5V2 710 aa11.34□□□□□ -0.59
ERBB3-211ENST00000549644 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
ERBB3-211ENST00000549644 IFT57Q9NWB7 429 aa11.34□□□□□ -0.59
ERBB3-211ENST00000549644 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
ERBB3-211ENST00000549644 RIC1Q4ADV7 1423 aa11.34□□□□□ -0.59
ERBB3-211ENST00000549644 APAF1O14727 1248 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 SRGNP10124 158 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 NPR1P16066 1061 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 PIP4K2AP48426 406 aaPredicted RBP11.33□□□□□ -0.6
ERBB3-211ENST00000549644 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 WWC3Q9ULE0 1092 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 KDM2BQ8NHM5 1336 aa11.33□□□□□ -0.6
ERBB3-211ENST00000549644 MYL6BP14649 208 aa11.32□□□□□ -0.6
ERBB3-211ENST00000549644 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
ERBB3-211ENST00000549644 LMNB1P20700 586 aa11.32□□□□□ -0.6
ERBB3-211ENST00000549644 ALDH1B1P30837 517 aa11.32□□□□□ -0.6
ERBB3-211ENST00000549644 C1QTNF8P60827 252 aa11.32□□□□□ -0.6
ERBB3-211ENST00000549644 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.6
ERBB3-211ENST00000549644 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
ERBB3-211ENST00000549644 LTBP3Q9NS15 1303 aa11.32□□□□□ -0.6
ERBB3-211ENST00000549644 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
ERBB3-211ENST00000549644 PDIA6Q15084 440 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 HLFQ16534 295 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 C9orf131Q5VYM1 1079 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 ZNF34Q8IZ26 560 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 LAS1LQ9Y4W2 734 aaKnown RBP11.31□□□□□ -0.6
ERBB3-211ENST00000549644 COL11A2P13942 1736 aaPredicted RBP11.31□□□□□ -0.6
ERBB3-211ENST00000549644 FER1L6Q2WGJ9 1857 aa11.31□□□□□ -0.6
ERBB3-211ENST00000549644 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
ERBB3-211ENST00000549644 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 CC2D2BQ6DHV5 1058 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 MRS2Q9HD23 443 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 RNF181Q9P0P0 153 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 ANKRD36CQ5JPF3 1778 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 IL16Q14005 1332 aa11.3□□□□□ -0.6
ERBB3-211ENST00000549644 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
ERBB3-211ENST00000549644 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
ERBB3-211ENST00000549644 CRY2Q49AN0 593 aa11.29□□□□□ -0.6
ERBB3-211ENST00000549644 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
ERBB3-211ENST00000549644 RTKN2Q8IZC4 609 aa11.29□□□□□ -0.6
ERBB3-211ENST00000549644 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
ERBB3-211ENST00000549644 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
ERBB3-211ENST00000549644 SLX4Q8IY92 1834 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
ERBB3-211ENST00000549644 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
ERBB3-211ENST00000549644 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 UTP14AQ9BVJ6 771 aaKnown RBP11.28□□□□□ -0.6
ERBB3-211ENST00000549644 TAOK3Q9H2K8 898 aa11.28□□□□□ -0.6
ERBB3-211ENST00000549644 CACNA1SQ13698 1873 aa11.27□□□□□ -0.6
ERBB3-211ENST00000549644 C21orf2O43822 256 aa11.27□□□□□ -0.61
ERBB3-211ENST00000549644 HOXA10P31260 410 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-211ENST00000549644 TCIRG1Q13488 830 aa11.27□□□□□ -0.61
ERBB3-211ENST00000549644 CCDC93Q567U6 631 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms