RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 PANK3Q9H999 370 aa9.17□□□□□ -0.94
TMEM116-208ENST00000549537 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
TMEM116-208ENST00000549537 ZCRB1Q8TBF4 217 aaKnown RBP9.16□□□□□ -0.94
TMEM116-208ENST00000549537 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
TMEM116-208ENST00000549537 POLR3GLQ9BT43 218 aa9.16□□□□□ -0.94
TMEM116-208ENST00000549537 POLKQ9UBT6 870 aa9.16□□□□□ -0.94
TMEM116-208ENST00000549537 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-208ENST00000549537 KIF7Q2M1P5 1343 aa9.15□□□□□ -0.94
TMEM116-208ENST00000549537 LY75O60449 1722 aa9.15□□□□□ -0.94
TMEM116-208ENST00000549537 TOGARAM1Q9Y4F4 1720 aa9.15□□□□□ -0.94
TMEM116-208ENST00000549537 YY1P25490 414 aa9.15□□□□□ -0.94
TMEM116-208ENST00000549537 DPYSL4O14531 572 aa9.14□□□□□ -0.95
TMEM116-208ENST00000549537 RAPGEF4Q8WZA2 1011 aa9.14□□□□□ -0.95
TMEM116-208ENST00000549537 PDGFDQ9GZP0 370 aaPredicted RBP9.14□□□□□ -0.95
TMEM116-208ENST00000549537 LRRC4BQ9NT99 713 aa9.14□□□□□ -0.95
TMEM116-208ENST00000549537 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
TMEM116-208ENST00000549537 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
TMEM116-208ENST00000549537 SLC15A2Q16348 729 aa9.13□□□□□ -0.95
TMEM116-208ENST00000549537 EYA1Q99502 592 aa9.13□□□□□ -0.95
TMEM116-208ENST00000549537 QSER1Q2KHR3 1735 aa9.13□□□□□ -0.95
TMEM116-208ENST00000549537 PCDH11XQ9BZA7 1347 aa9.12□□□□□ -0.95
TMEM116-208ENST00000549537 PCDH11YQ9BZA8 1340 aa9.12□□□□□ -0.95
TMEM116-208ENST00000549537 PPM1GO15355 546 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-208ENST00000549537 CYP27B1O15528 508 aa9.12□□□□□ -0.95
TMEM116-208ENST00000549537 TATP17735 454 aaPredicted RBP9.12□□□□□ -0.95
TMEM116-208ENST00000549537 PPP4CP60510 307 aa9.12□□□□□ -0.95
TMEM116-208ENST00000549537 EIF4A2Q14240 407 aaKnown RBP9.12□□□□□ -0.95
TMEM116-208ENST00000549537 TUBGCP6Q96RT7 1819 aa9.12□□□□□ -0.95
TMEM116-208ENST00000549537 ITGB4P16144 1822 aa9.11□□□□□ -0.95
TMEM116-208ENST00000549537 PER1O15534 1290 aaPredicted RBP9.11□□□□□ -0.95
TMEM116-208ENST00000549537 TNNT2P45379 298 aaPredicted RBP9.11□□□□□ -0.95
TMEM116-208ENST00000549537 ZNF827Q17R98 1081 aa9.11□□□□□ -0.95
TMEM116-208ENST00000549537 NPM2Q86SE8 214 aaKnown RBP9.11□□□□□ -0.95
TMEM116-208ENST00000549537 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
TMEM116-208ENST00000549537 KAT6BQ8WYB5 2073 aa9.11□□□□□ -0.95
TMEM116-208ENST00000549537 PLEKHG2Q9H7P9 1386 aa9.11□□□□□ -0.95
TMEM116-208ENST00000549537 IGSF1Q8N6C5 1336 aa9.1□□□□□ -0.95
TMEM116-208ENST00000549537 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
TMEM116-208ENST00000549537 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
TMEM116-208ENST00000549537 DDX12PQ92771 950 aa9.1□□□□□ -0.95
TMEM116-208ENST00000549537 SPON1Q9HCB6 807 aa9.1□□□□□ -0.95
TMEM116-208ENST00000549537 COL24A1Q17RW2 1714 aa9.1□□□□□ -0.95
TMEM116-208ENST00000549537 MAP3K7O43318 606 aa9.09□□□□□ -0.95
TMEM116-208ENST00000549537 SYTL4Q96C24 671 aaPredicted RBP9.09□□□□□ -0.95
TMEM116-208ENST00000549537 KNSTRNQ9Y448 316 aa9.09□□□□□ -0.95
TMEM116-208ENST00000549537 TAF1LQ8IZX4 1826 aa9.08□□□□□ -0.96
TMEM116-208ENST00000549537 C5P01031 1676 aa9.08□□□□□ -0.96
TMEM116-208ENST00000549537 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
TMEM116-208ENST00000549537 ZBTB7AO95365 584 aa9.08□□□□□ -0.96
TMEM116-208ENST00000549537 KCNQ4P56696 695 aa9.08□□□□□ -0.96
TMEM116-208ENST00000549537 MORC1Q86VD1 984 aa9.08□□□□□ -0.96
TMEM116-208ENST00000549537 PHKG2P15735 406 aa9.07□□□□□ -0.96
TMEM116-208ENST00000549537 MTFR1LQ9H019 292 aa9.07□□□□□ -0.96
TMEM116-208ENST00000549537 SPG7Q9UQ90 795 aa9.07□□□□□ -0.96
TMEM116-208ENST00000549537 KDRP35968 1356 aa9.07□□□□□ -0.96
TMEM116-208ENST00000549537 NPC1L1Q9UHC9 1359 aa9.07□□□□□ -0.96
TMEM116-208ENST00000549537 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
TMEM116-208ENST00000549537 IL13P35225 146 aa9.06□□□□□ -0.96
TMEM116-208ENST00000549537 E2F4Q16254 413 aa9.06□□□□□ -0.96
TMEM116-208ENST00000549537 PIGBQ92521 554 aa9.06□□□□□ -0.96
TMEM116-208ENST00000549537 CCNL1Q9UK58 526 aaPredicted RBP9.06□□□□□ -0.96
TMEM116-208ENST00000549537 PALLDQ8WX93 1383 aa9.06□□□□□ -0.96
TMEM116-208ENST00000549537 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-208ENST00000549537 PDIA6Q15084 440 aa9.05□□□□□ -0.96
TMEM116-208ENST00000549537 MPRIPQ6WCQ1 1025 aa9.05□□□□□ -0.96
TMEM116-208ENST00000549537 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
TMEM116-208ENST00000549537 IFNL2Q8IZJ0 200 aa9.05□□□□□ -0.96
TMEM116-208ENST00000549537 ZNF784Q8NCA9 323 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-208ENST00000549537 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
TMEM116-208ENST00000549537 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
TMEM116-208ENST00000549537 GFRA3O60609 400 aa9.04□□□□□ -0.96
TMEM116-208ENST00000549537 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
TMEM116-208ENST00000549537 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
TMEM116-208ENST00000549537 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-208ENST00000549537 C4BP0C0L5 1744 aa9.04□□□□□ -0.96
TMEM116-208ENST00000549537 ZNF831Q5JPB2 1677 aa9.04□□□□□ -0.96
TMEM116-208ENST00000549537 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 UBR3Q6ZT12 1888 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 MTHFSP49914 203 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 PRSS12P56730 875 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 CC2D1BQ5T0F9 858 aaKnown RBP9.03□□□□□ -0.96
TMEM116-208ENST00000549537 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 SLC16A10Q8TF71 515 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 SMARCC1Q92922 1105 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-208ENST00000549537 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 TFCP2L1Q9NZI6 479 aa9.03□□□□□ -0.96
TMEM116-208ENST00000549537 ADAMTS7Q9UKP4 1686 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
TMEM116-208ENST00000549537 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 PLEKHO1Q53GL0 409 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-208ENST00000549537 SULT6B1Q6IMI4 303 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 COL23A1Q86Y22 540 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-208ENST00000549537 ATG3Q9NT62 314 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 TMOD3Q9NYL9 352 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
TMEM116-208ENST00000549537 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-208ENST00000549537 SCN11AQ9UI33 1791 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 488.5 ms