RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
SMARCD1-206ENST00000549274 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
SMARCD1-206ENST00000549274 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
SMARCD1-206ENST00000549274 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 NBPF26B4DH59 902 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 NBPF10Q6P3W6 841 aaKnown RBP12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 COPS6Q7L5N1 327 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 RIC3Q7Z5B4 369 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 SCN7AQ01118 1682 aa12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
SMARCD1-206ENST00000549274 C4AP0C0L4 1744 aa12.4□□□□□ -0.43
SMARCD1-206ENST00000549274 TUBGCP6Q96RT7 1819 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 ANKRD36CQ5JPF3 1778 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 KCNQ4P56696 695 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 KSR2Q6VAB6 950 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 ATF7IPQ6VMQ6 1270 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 FRAT1Q92837 279 aaPredicted RBP12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 NARFQ9UHQ1 456 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 NUP98P52948 1817 aa12.39□□□□□ -0.43
SMARCD1-206ENST00000549274 HSP90B1P14625 803 aaKnown RBP12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 AIMP1Q12904 312 aaKnown RBP12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 ARXQ96QS3 562 aa12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
SMARCD1-206ENST00000549274 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 SOCS7O14512 581 aa12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 BCAR3O75815 825 aa12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 PROSER3Q2NL68 480 aa12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
SMARCD1-206ENST00000549274 PI4KAP2A4QPH2 592 aa12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 TCERG1O14776 1098 aaKnown RBP12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 PHF14O94880 888 aa12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 ANXA1P04083 346 aa12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 ZNF827Q17R98 1081 aa12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 PI4KAP1Q8N8J0 262 aa12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
SMARCD1-206ENST00000549274 AFDNP55196 1824 aaKnown RBP12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 ALDH1L1O75891 902 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 CAMTA2O94983 1202 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 NEFLP07196 543 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 TCIRG1Q13488 830 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 AAMPQ13685 434 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 ABCC4O15439 1325 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
SMARCD1-206ENST00000549274 ADCY9O60503 1353 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 TRIM27P14373 513 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 TTLL7Q6ZT98 887 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 G2E3Q7L622 706 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 TBC1D2BQ9UPU7 963 aa12.34□□□□□ -0.43
SMARCD1-206ENST00000549274 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
SMARCD1-206ENST00000549274 INTS3Q68E01 1043 aaKnown RBP12.33□□□□□ -0.44
SMARCD1-206ENST00000549274 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
SMARCD1-206ENST00000549274 SETDB2Q96T68 719 aa12.33□□□□□ -0.44
SMARCD1-206ENST00000549274 DDX19BQ9UMR2 479 aa12.33□□□□□ -0.44
SMARCD1-206ENST00000549274 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
SMARCD1-206ENST00000549274 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
SMARCD1-206ENST00000549274 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
SMARCD1-206ENST00000549274 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
SMARCD1-206ENST00000549274 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
SMARCD1-206ENST00000549274 GYS1P13807 737 aa12.31□□□□□ -0.44
SMARCD1-206ENST00000549274 MYD88Q99836 296 aa12.31□□□□□ -0.44
SMARCD1-206ENST00000549274 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
SMARCD1-206ENST00000549274 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMARCD1-206ENST00000549274 COL24A1Q17RW2 1714 aa12.31□□□□□ -0.44
SMARCD1-206ENST00000549274 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
SMARCD1-206ENST00000549274 NEURL1BA8MQ27 555 aa12.3□□□□□ -0.44
SMARCD1-206ENST00000549274 F6X3S4 739 aa12.3□□□□□ -0.44
SMARCD1-206ENST00000549274 NPHP1O15259 732 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms