RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
DEPDC4-207ENST00000549249 ZNF790Q6PG37 636 aa10.39□□□□□ -0.75
DEPDC4-207ENST00000549249 BCL9O00512 1426 aa10.39□□□□□ -0.75
DEPDC4-207ENST00000549249 NHSQ6T4R5 1651 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 PRAMEF22A3QJZ6 481 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 SPNS2Q8IVW8 549 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 PIGBQ92521 554 aa10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 ZNF496Q96IT1 587 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 N4BP2Q86UW6 1770 aaPredicted RBP10.38□□□□□ -0.75
DEPDC4-207ENST00000549249 KIF16BQ96L93 1317 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 A0A0G2JS52 829 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 HOXB7P09629 217 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 RLBP1P12271 317 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 MYT1Q01538 1121 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 TJP1Q07157 1748 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 MMRN1Q13201 1228 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 CRBNQ96SW2 442 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 TMOD3Q9NYL9 352 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 NOB1Q9ULX3 412 aaKnown RBP10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 BTAF1O14981 1849 aa10.37□□□□□ -0.75
DEPDC4-207ENST00000549249 TRIM27P14373 513 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 PANK1Q8TE04 598 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 CICQ96RK0 1608 aaPredicted RBP10.36□□□□□ -0.75
DEPDC4-207ENST00000549249 PRIM1P49642 420 aaKnown RBP10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 EMP3P54852 163 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 G2E3Q7L622 706 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 KRT27Q7Z3Y8 459 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ACSBG1Q96GR2 724 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
DEPDC4-207ENST00000549249 EIF2S2P20042 333 aaKnown RBP10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 ERICH6BQ5W0A0 696 aa10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 CLUAP1Q96AJ1 413 aa10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
DEPDC4-207ENST00000549249 ABCC4O15439 1325 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 KCNQ2O43526 872 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 ANXA1P04083 346 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 SNRPA1P09661 255 aaKnown RBP10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 PDIA6Q15084 440 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 FAM182BQ5T319 152 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 ARHGAP45Q92619 1136 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 USP16Q9Y5T5 823 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 ZNF831Q5JPB2 1677 aa10.33□□□□□ -0.76
DEPDC4-207ENST00000549249 RREB1Q92766 1687 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 G3V3G9 751 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 BAG6P46379 1132 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PROSER3Q2NL68 480 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 TMEM57Q8N5G2 664 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 SYTL4Q96C24 671 aaPredicted RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 SLC4A9Q96Q91 983 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PHAXQ9H814 394 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 LY75O60449 1722 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 COL5A3P25940 1745 aaPredicted RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 MYH14Q7Z406 1995 aaKnown RBP10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 PTPRCP08575 1304 aa10.32□□□□□ -0.76
DEPDC4-207ENST00000549249 FLIIQ13045 1269 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 LRP10Q7Z4F1 713 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 HS6ST3Q8IZP7 471 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 PPP4R2Q9NY27 417 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
DEPDC4-207ENST00000549249 TAF1LQ8IZX4 1826 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 F6X3S4 739 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 DEFB132Q7Z7B7 95 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 FTSJ3Q8IY81 847 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
DEPDC4-207ENST00000549249 ADCY9O60503 1353 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 MS4A1P11836 297 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
DEPDC4-207ENST00000549249 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms