RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 NGEFQ8N5V2 710 aa19.25■□□□□ 0.67
LINC00661-203ENST00000549131 ZNF526Q8TF50 670 aaPredicted RBP19.25■□□□□ 0.67
LINC00661-203ENST00000549131 H0YIN7 160 aa19.24■□□□□ 0.67
LINC00661-203ENST00000549131 MYL6BP14649 208 aa19.24■□□□□ 0.67
LINC00661-203ENST00000549131 ST5P78524 1137 aa19.24■□□□□ 0.67
LINC00661-203ENST00000549131 CLEC4GQ6UXB4 293 aa19.24■□□□□ 0.67
LINC00661-203ENST00000549131 BABAM1Q9NWV8 329 aa19.24■□□□□ 0.67
LINC00661-203ENST00000549131 TNRC6CQ9HCJ0 1690 aaKnown RBP19.24■□□□□ 0.67
LINC00661-203ENST00000549131 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
LINC00661-203ENST00000549131 GPBP1L1Q9HC44 474 aaPredicted RBP19.23■□□□□ 0.67
LINC00661-203ENST00000549131 TRIM35Q9UPQ4 493 aa19.23■□□□□ 0.67
LINC00661-203ENST00000549131 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
LINC00661-203ENST00000549131 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
LINC00661-203ENST00000549131 PDE6BP35913 854 aa19.22■□□□□ 0.67
LINC00661-203ENST00000549131 KIF6Q6ZMV9 814 aa19.22■□□□□ 0.67
LINC00661-203ENST00000549131 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
LINC00661-203ENST00000549131 ERBB4Q15303 1308 aa19.22■□□□□ 0.67
LINC00661-203ENST00000549131 SLX4Q8IY92 1834 aa19.21■□□□□ 0.67
LINC00661-203ENST00000549131 RGL2O15211 777 aa19.21■□□□□ 0.67
LINC00661-203ENST00000549131 EIF2S2P20042 333 aaKnown RBP19.21■□□□□ 0.67
LINC00661-203ENST00000549131 FER1L6Q2WGJ9 1857 aa19.21■□□□□ 0.67
LINC00661-203ENST00000549131 TTLL6Q8N841 843 aa19.21■□□□□ 0.67
LINC00661-203ENST00000549131 FAM177BA6PVY3 158 aa19.2■□□□□ 0.66
LINC00661-203ENST00000549131 HLFQ16534 295 aa19.2■□□□□ 0.66
LINC00661-203ENST00000549131 ZNF622Q969S3 477 aaKnown RBP eCLIP19.2■□□□□ 0.66
LINC00661-203ENST00000549131 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
LINC00661-203ENST00000549131 TTLL7Q6ZT98 887 aa19.19■□□□□ 0.66
LINC00661-203ENST00000549131 ZBTB3Q9H5J0 574 aa19.19■□□□□ 0.66
LINC00661-203ENST00000549131 PDZRN3Q9UPQ7 1066 aa19.19■□□□□ 0.66
LINC00661-203ENST00000549131 DICER1Q9UPY3 1922 aaKnown RBP19.18■□□□□ 0.66
LINC00661-203ENST00000549131 APAF1O14727 1248 aa19.18■□□□□ 0.66
LINC00661-203ENST00000549131 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
LINC00661-203ENST00000549131 ERVV-1B6SEH8 477 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 CHL1O00533 1208 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 RASSF7Q02833 373 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 CCDC184Q52MB2 194 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 NECTIN2Q92692 538 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 RNF181Q9P0P0 153 aa19.17■□□□□ 0.66
LINC00661-203ENST00000549131 ANP32CO43423 234 aa19.16■□□□□ 0.66
LINC00661-203ENST00000549131 ANXA1P04083 346 aa19.16■□□□□ 0.66
LINC00661-203ENST00000549131 C1QTNF8P60827 252 aa19.16■□□□□ 0.66
LINC00661-203ENST00000549131 PROSER3Q2NL68 480 aa19.16■□□□□ 0.66
LINC00661-203ENST00000549131 TPTE2Q6XPS3 522 aa19.16■□□□□ 0.66
LINC00661-203ENST00000549131 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
LINC00661-203ENST00000549131 GPTP24298 496 aa19.15■□□□□ 0.66
LINC00661-203ENST00000549131 GTF2E1P29083 439 aaPredicted RBP19.15■□□□□ 0.66
LINC00661-203ENST00000549131 LAMB2P55268 1798 aa19.14■□□□□ 0.66
LINC00661-203ENST00000549131 PDIA6Q15084 440 aa19.14■□□□□ 0.65
LINC00661-203ENST00000549131 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
LINC00661-203ENST00000549131 MRS2Q9HD23 443 aa19.14■□□□□ 0.65
LINC00661-203ENST00000549131 ABCC12Q96J65 1359 aa19.14■□□□□ 0.65
LINC00661-203ENST00000549131 SRGNP10124 158 aa19.13■□□□□ 0.65
LINC00661-203ENST00000549131 STYK1Q6J9G0 422 aa19.13■□□□□ 0.65
LINC00661-203ENST00000549131 MASTLQ96GX5 879 aa19.13■□□□□ 0.65
LINC00661-203ENST00000549131 NYXQ9GZU5 481 aa19.13■□□□□ 0.65
LINC00661-203ENST00000549131 MBIPQ9NS73 344 aa19.13■□□□□ 0.65
LINC00661-203ENST00000549131 UBN2Q6ZU65 1347 aa19.13■□□□□ 0.65
LINC00661-203ENST00000549131 IBTKQ9P2D0 1353 aaPredicted RBP19.13■□□□□ 0.65
LINC00661-203ENST00000549131 C21orf2O43822 256 aa19.12■□□□□ 0.65
LINC00661-203ENST00000549131 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
LINC00661-203ENST00000549131 HDGFL1Q5TGJ6 251 aa19.12■□□□□ 0.65
LINC00661-203ENST00000549131 PRPF40BQ6NWY9 871 aaKnown RBP19.12■□□□□ 0.65
LINC00661-203ENST00000549131 LRP10Q7Z4F1 713 aa19.12■□□□□ 0.65
LINC00661-203ENST00000549131 CNKSR1Q969H4 720 aa19.12■□□□□ 0.65
LINC00661-203ENST00000549131 GIGYF2Q6Y7W6 1299 aaKnown RBP19.11■□□□□ 0.65
LINC00661-203ENST00000549131 NUTM1Q86Y26 1132 aa19.11■□□□□ 0.65
LINC00661-203ENST00000549131 IFT57Q9NWB7 429 aa19.11■□□□□ 0.65
LINC00661-203ENST00000549131 CHPF2Q9P2E5 772 aa19.11■□□□□ 0.65
LINC00661-203ENST00000549131 RIC1Q4ADV7 1423 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 NFKBIEO00221 500 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 HOXB7P09629 217 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 NPR1P16066 1061 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 LMNB1P20700 586 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 GNAI1P63096 354 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 AIMP1Q12904 312 aaKnown RBP19.1■□□□□ 0.65
LINC00661-203ENST00000549131 XAGE3Q8WTP9 111 aa19.1■□□□□ 0.65
LINC00661-203ENST00000549131 DDX21Q9NR30 783 aaKnown RBP eCLIP19.1■□□□□ 0.65
LINC00661-203ENST00000549131 ERFEQ4G0M1 354 aa19.09■□□□□ 0.65
LINC00661-203ENST00000549131 COPS6Q7L5N1 327 aa19.09■□□□□ 0.65
LINC00661-203ENST00000549131 ZNF34Q8IZ26 560 aa19.09■□□□□ 0.65
LINC00661-203ENST00000549131 ZNF853P0CG23 659 aa19.08■□□□□ 0.64
LINC00661-203ENST00000549131 DUSP27Q5VZP5 1158 aa19.08■□□□□ 0.64
LINC00661-203ENST00000549131 ZC3H4Q9UPT8 1303 aaKnown RBP19.07■□□□□ 0.64
LINC00661-203ENST00000549131 KLRG2A4D1S0 409 aaPredicted RBP19.07■□□□□ 0.64
LINC00661-203ENST00000549131 NTSR2O95665 410 aa19.07■□□□□ 0.64
LINC00661-203ENST00000549131 PRELPP51888 382 aa19.07■□□□□ 0.64
LINC00661-203ENST00000549131 PARP10Q53GL7 1025 aa19.07■□□□□ 0.64
LINC00661-203ENST00000549131 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
LINC00661-203ENST00000549131 SUSD4Q5VX71 490 aa19.07■□□□□ 0.64
LINC00661-203ENST00000549131 NMRK2Q9NPI5 230 aa19.07■□□□□ 0.64
LINC00661-203ENST00000549131 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
LINC00661-203ENST00000549131 KDM2BQ8NHM5 1336 aa19.06■□□□□ 0.64
LINC00661-203ENST00000549131 KIF3CO14782 793 aa19.06■□□□□ 0.64
LINC00661-203ENST00000549131 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
LINC00661-203ENST00000549131 TAOK3Q9H2K8 898 aa19.06■□□□□ 0.64
LINC00661-203ENST00000549131 DBF4Q9UBU7 674 aaPredicted RBP19.06■□□□□ 0.64
LINC00661-203ENST00000549131 HSP90AB3PQ58FF7 597 aa19.05■□□□□ 0.64
LINC00661-203ENST00000549131 RPGRQ92834 1020 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms