RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ATXN7O15265 892 aaPredicted RBP9.03□□□□□ -0.96
CCDC38-206ENST00000548771 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
CCDC38-206ENST00000548771 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
CCDC38-206ENST00000548771 BTBD6Q96KE9 485 aa9.03□□□□□ -0.96
CCDC38-206ENST00000548771 FAM157BP0CG42 384 aa9.02□□□□□ -0.97
CCDC38-206ENST00000548771 MAPTP10636 758 aaKnown RBP9.02□□□□□ -0.97
CCDC38-206ENST00000548771 TATP17735 454 aaPredicted RBP9.02□□□□□ -0.97
CCDC38-206ENST00000548771 DOC2BQ14184 412 aa9.02□□□□□ -0.97
CCDC38-206ENST00000548771 ARSJQ5FYB0 599 aaPredicted RBP9.02□□□□□ -0.97
CCDC38-206ENST00000548771 TBCELQ5QJ74 424 aa9.02□□□□□ -0.97
CCDC38-206ENST00000548771 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
CCDC38-206ENST00000548771 SH3PXD2AQ5TCZ1 1133 aa9.02□□□□□ -0.97
CCDC38-206ENST00000548771 PPP1R12CQ9BZL4 782 aa9.02□□□□□ -0.97
CCDC38-206ENST00000548771 EFSO43281 561 aa9.01□□□□□ -0.97
CCDC38-206ENST00000548771 HIRAP54198 1017 aaPredicted RBP9.01□□□□□ -0.97
CCDC38-206ENST00000548771 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
CCDC38-206ENST00000548771 TSPAN10Q9H1Z9 355 aaPredicted RBP9.01□□□□□ -0.97
CCDC38-206ENST00000548771 GNB5O14775 395 aa9□□□□□ -0.97
CCDC38-206ENST00000548771 C21orf2O43822 256 aa9□□□□□ -0.97
CCDC38-206ENST00000548771 EPXP11678 715 aa9□□□□□ -0.97
CCDC38-206ENST00000548771 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
CCDC38-206ENST00000548771 KLF15Q9UIH9 416 aa9□□□□□ -0.97
CCDC38-206ENST00000548771 GPC6Q9Y625 555 aaPredicted RBP9□□□□□ -0.97
CCDC38-206ENST00000548771 SERTM1A2A2V5 107 aa8.99□□□□□ -0.97
CCDC38-206ENST00000548771 SFI1A8K8P3 1242 aa8.99□□□□□ -0.97
CCDC38-206ENST00000548771 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
CCDC38-206ENST00000548771 ARAFP10398 606 aa8.99□□□□□ -0.97
CCDC38-206ENST00000548771 DGKGP49619 791 aa8.99□□□□□ -0.97
CCDC38-206ENST00000548771 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
CCDC38-206ENST00000548771 CALR3Q96L12 384 aaKnown RBP8.99□□□□□ -0.97
CCDC38-206ENST00000548771 PSMA6P60900 246 aaKnown RBP8.98□□□□□ -0.97
CCDC38-206ENST00000548771 PTK7Q13308 1070 aa8.98□□□□□ -0.97
CCDC38-206ENST00000548771 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
CCDC38-206ENST00000548771 C1orf53Q5VUE5 145 aa8.98□□□□□ -0.97
CCDC38-206ENST00000548771 STAG2Q8N3U4 1231 aa8.98□□□□□ -0.97
CCDC38-206ENST00000548771 ZNF594Q96JF6 807 aaPredicted RBP8.98□□□□□ -0.97
CCDC38-206ENST00000548771 STRN4Q9NRL3 753 aa8.98□□□□□ -0.97
CCDC38-206ENST00000548771 DCDC2BA2VCK2 349 aa8.97□□□□□ -0.97
CCDC38-206ENST00000548771 RASA1P20936 1047 aa8.97□□□□□ -0.97
CCDC38-206ENST00000548771 AVENQ9NQS1 362 aaPredicted RBP8.97□□□□□ -0.97
CCDC38-206ENST00000548771 KHNYNO15037 678 aaKnown RBP8.96□□□□□ -0.98
CCDC38-206ENST00000548771 CD33P20138 364 aa8.96□□□□□ -0.98
CCDC38-206ENST00000548771 CRTC2Q53ET0 693 aaPredicted RBP8.96□□□□□ -0.98
CCDC38-206ENST00000548771 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
CCDC38-206ENST00000548771 ATAD2Q6PL18 1390 aa8.96□□□□□ -0.98
CCDC38-206ENST00000548771 SEC13P55735 322 aa8.95□□□□□ -0.98
CCDC38-206ENST00000548771 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
CCDC38-206ENST00000548771 MDFIQ99750 246 aa8.95□□□□□ -0.98
CCDC38-206ENST00000548771 MARK1Q9P0L2 795 aa8.95□□□□□ -0.98
CCDC38-206ENST00000548771 ZNF232Q9UNY5 417 aa8.95□□□□□ -0.98
CCDC38-206ENST00000548771 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
CCDC38-206ENST00000548771 ZMYM1Q5SVZ6 1142 aa8.94□□□□□ -0.98
CCDC38-206ENST00000548771 CFAP70Q5T0N1 1121 aa8.94□□□□□ -0.98
CCDC38-206ENST00000548771 LRRC69Q6ZNQ3 347 aa8.94□□□□□ -0.98
CCDC38-206ENST00000548771 CHSY3Q70JA7 882 aa8.94□□□□□ -0.98
CCDC38-206ENST00000548771 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
CCDC38-206ENST00000548771 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
CCDC38-206ENST00000548771 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
CCDC38-206ENST00000548771 FCHSD1Q86WN1 690 aa8.93□□□□□ -0.98
CCDC38-206ENST00000548771 ARXQ96QS3 562 aa8.93□□□□□ -0.98
CCDC38-206ENST00000548771 HCN4Q9Y3Q4 1203 aa8.93□□□□□ -0.98
CCDC38-206ENST00000548771 LMOD1P29536 600 aaPredicted RBP8.92□□□□□ -0.98
CCDC38-206ENST00000548771 ZNF468Q5VIY5 522 aaPredicted RBP8.92□□□□□ -0.98
CCDC38-206ENST00000548771 TRIM11Q96F44 468 aa8.92□□□□□ -0.98
CCDC38-206ENST00000548771 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
CCDC38-206ENST00000548771 VRTNQ9H8Y1 702 aa8.92□□□□□ -0.98
CCDC38-206ENST00000548771 ZNF777Q9ULD5 760 aaPredicted RBP8.92□□□□□ -0.98
CCDC38-206ENST00000548771 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L15C9J2P7 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L10C9JJH3 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L13C9JLJ4 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L11C9JVI0 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L21D6R901 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L18D6R9N7 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L22D6RA61 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L17D6RBQ6 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L19D6RCP7 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L20D6RJB6 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 PPP1R12BO60237 982 aaPredicted RBP8.91□□□□□ -0.98
CCDC38-206ENST00000548771 USP17L24Q0WX57 530 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 DPYDQ12882 1025 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 LARP1Q6PKG0 1096 aaKnown RBP8.91□□□□□ -0.98
CCDC38-206ENST00000548771 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 ANKMY2Q8IV38 441 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 RHPN1Q8TCX5 695 aa8.91□□□□□ -0.98
CCDC38-206ENST00000548771 ADH6P28332 368 aa8.9□□□□□ -0.98
CCDC38-206ENST00000548771 KCNQ4P56696 695 aa8.9□□□□□ -0.98
CCDC38-206ENST00000548771 SFSWAPQ12872 951 aaKnown RBP8.9□□□□□ -0.98
CCDC38-206ENST00000548771 ALDH16A1Q8IZ83 802 aa8.9□□□□□ -0.98
CCDC38-206ENST00000548771 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
CCDC38-206ENST00000548771 SCG3Q8WXD2 468 aaKnown RBP8.9□□□□□ -0.98
CCDC38-206ENST00000548771 NOP53Q9NZM5 478 aaKnown RBP8.9□□□□□ -0.98
CCDC38-206ENST00000548771 PIK3R2O00459 728 aa8.89□□□□□ -0.99
CCDC38-206ENST00000548771 SUSD3Q96L08 255 aa8.89□□□□□ -0.99
CCDC38-206ENST00000548771 PLVAPQ9BX97 442 aa8.89□□□□□ -0.99
CCDC38-206ENST00000548771 CHMP3Q9Y3E7 222 aa8.89□□□□□ -0.99
CCDC38-206ENST00000548771 RBM19Q9Y4C8 960 aaKnown RBP8.89□□□□□ -0.99
CCDC38-206ENST00000548771 GATA4P43694 442 aa8.88□□□□□ -0.99
CCDC38-206ENST00000548771 PCBP4P57723 403 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms