RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
BEST3-209ENST00000548658 ST5P78524 1137 aa14.93□□□□□ -0.02
BEST3-209ENST00000548658 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
BEST3-209ENST00000548658 ADAMTS8Q9UP79 889 aa14.93□□□□□ -0.02
BEST3-209ENST00000548658 SCN7AQ01118 1682 aa14.93□□□□□ -0.02
BEST3-209ENST00000548658 ERBB4Q15303 1308 aa14.92□□□□□ -0.02
BEST3-209ENST00000548658 ARFGEF1Q9Y6D6 1849 aa14.92□□□□□ -0.02
BEST3-209ENST00000548658 TPTE2Q6XPS3 522 aa14.92□□□□□ -0.02
BEST3-209ENST00000548658 NBPF5PQ86XG9 351 aaPredicted RBP14.92□□□□□ -0.02
BEST3-209ENST00000548658 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
BEST3-209ENST00000548658 ERVV-1B6SEH8 477 aa14.91□□□□□ -0.02
BEST3-209ENST00000548658 ZBTB22O15209 634 aa14.91□□□□□ -0.02
BEST3-209ENST00000548658 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
BEST3-209ENST00000548658 NEUROD2Q15784 382 aa14.91□□□□□ -0.02
BEST3-209ENST00000548658 CCDC146Q8IYE0 955 aa14.91□□□□□ -0.02
BEST3-209ENST00000548658 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
BEST3-209ENST00000548658 KIF6Q6ZMV9 814 aa14.9□□□□□ -0.02
BEST3-209ENST00000548658 NIP7Q9Y221 180 aaKnown RBP eCLIP14.9□□□□□ -0.02
BEST3-209ENST00000548658 RRP7AQ9Y3A4 280 aaKnown RBP14.9□□□□□ -0.02
BEST3-209ENST00000548658 C9orf131Q5VYM1 1079 aa14.89□□□□□ -0.03
BEST3-209ENST00000548658 ZNF526Q8TF50 670 aaPredicted RBP14.89□□□□□ -0.03
BEST3-209ENST00000548658 CNKSR1Q969H4 720 aa14.89□□□□□ -0.03
BEST3-209ENST00000548658 ZNF622Q969S3 477 aaKnown RBP eCLIP14.89□□□□□ -0.03
BEST3-209ENST00000548658 LAMB4A4D0S4 1761 aa14.88□□□□□ -0.03
BEST3-209ENST00000548658 CHL1O00533 1208 aa14.88□□□□□ -0.03
BEST3-209ENST00000548658 GTF2E1P29083 439 aaPredicted RBP14.88□□□□□ -0.03
BEST3-209ENST00000548658 STYK1Q6J9G0 422 aa14.88□□□□□ -0.03
BEST3-209ENST00000548658 NGEFQ8N5V2 710 aa14.88□□□□□ -0.03
BEST3-209ENST00000548658 MAP3K15Q6ZN16 1313 aa14.88□□□□□ -0.03
BEST3-209ENST00000548658 BCORQ6W2J9 1755 aa14.88□□□□□ -0.03
BEST3-209ENST00000548658 SRGNP10124 158 aa14.87□□□□□ -0.03
BEST3-209ENST00000548658 MYL6BP14649 208 aa14.87□□□□□ -0.03
BEST3-209ENST00000548658 MASTLQ96GX5 879 aa14.87□□□□□ -0.03
BEST3-209ENST00000548658 NYXQ9GZU5 481 aa14.87□□□□□ -0.03
BEST3-209ENST00000548658 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
BEST3-209ENST00000548658 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
BEST3-209ENST00000548658 DLEC1Q9Y238 1755 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 EIF2S2P20042 333 aaKnown RBP14.86□□□□□ -0.03
BEST3-209ENST00000548658 LMNB1P20700 586 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
BEST3-209ENST00000548658 CALD1Q05682 793 aaKnown RBP14.86□□□□□ -0.03
BEST3-209ENST00000548658 HLFQ16534 295 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 SOGA3Q5TF21 947 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 CCDC24Q8N4L8 307 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 RNF181Q9P0P0 153 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 KDM2BQ8NHM5 1336 aa14.86□□□□□ -0.03
BEST3-209ENST00000548658 KLRG2A4D1S0 409 aaPredicted RBP14.85□□□□□ -0.03
BEST3-209ENST00000548658 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
BEST3-209ENST00000548658 CFAP44Q96MT7 982 aa14.85□□□□□ -0.03
BEST3-209ENST00000548658 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
BEST3-209ENST00000548658 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
BEST3-209ENST00000548658 HOXB7P09629 217 aa14.84□□□□□ -0.03
BEST3-209ENST00000548658 NPR1P16066 1061 aa14.84□□□□□ -0.03
BEST3-209ENST00000548658 TTLL7Q6ZT98 887 aa14.84□□□□□ -0.03
BEST3-209ENST00000548658 ANKRD31Q8N7Z5 1873 aa14.83□□□□□ -0.04
BEST3-209ENST00000548658 APAF1O14727 1248 aa14.83□□□□□ -0.04
BEST3-209ENST00000548658 C21orf2O43822 256 aa14.83□□□□□ -0.04
BEST3-209ENST00000548658 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
BEST3-209ENST00000548658 GIGYF2Q6Y7W6 1299 aaKnown RBP14.83□□□□□ -0.04
BEST3-209ENST00000548658 ZBTB3Q9H5J0 574 aa14.83□□□□□ -0.04
BEST3-209ENST00000548658 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 KIF3CO14782 793 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 TOMM70O94826 608 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 PDIA6Q15084 440 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 PARP10Q53GL7 1025 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 HSP90AB3PQ58FF7 597 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
BEST3-209ENST00000548658 PPP1R42Q7Z4L9 355 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
BEST3-209ENST00000548658 DDX21Q9NR30 783 aaKnown RBP eCLIP14.82□□□□□ -0.04
BEST3-209ENST00000548658 IBTKQ9P2D0 1353 aaPredicted RBP14.82□□□□□ -0.04
BEST3-209ENST00000548658 SBF1O95248 1867 aa14.81□□□□□ -0.04
BEST3-209ENST00000548658 ANP32CO43423 234 aa14.81□□□□□ -0.04
BEST3-209ENST00000548658 GNAI1P63096 354 aa14.81□□□□□ -0.04
BEST3-209ENST00000548658 RASSF7Q02833 373 aa14.81□□□□□ -0.04
BEST3-209ENST00000548658 ZNF34Q8IZ26 560 aa14.81□□□□□ -0.04
BEST3-209ENST00000548658 TAOK3Q9H2K8 898 aa14.81□□□□□ -0.04
BEST3-209ENST00000548658 NFKBIEO00221 500 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 LRP10Q7Z4F1 713 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 C16orf71Q8IYS4 520 aaPredicted RBP14.8□□□□□ -0.04
BEST3-209ENST00000548658 IFT57Q9NWB7 429 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
BEST3-209ENST00000548658 LTBP3Q9NS15 1303 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 NUP98P52948 1817 aa14.8□□□□□ -0.04
BEST3-209ENST00000548658 GPTP24298 496 aa14.79□□□□□ -0.04
BEST3-209ENST00000548658 CRY2Q49AN0 593 aa14.79□□□□□ -0.04
BEST3-209ENST00000548658 HDGFL1Q5TGJ6 251 aa14.79□□□□□ -0.04
BEST3-209ENST00000548658 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
BEST3-209ENST00000548658 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 GLTPD2A6NH11 291 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
BEST3-209ENST00000548658 ZNF853P0CG23 659 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 ERFEQ4G0M1 354 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 SUSD4Q5VX71 490 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 NUTM1Q86Y26 1132 aa14.78□□□□□ -0.04
BEST3-209ENST00000548658 RTKN2Q8IZC4 609 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms