RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 NFIXQ14938 502 aa12.47□□□□□ -0.41
USP15-208ENST00000548524 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
USP15-208ENST00000548524 A0A0G2JLW4 131 aa12.46□□□□□ -0.41
USP15-208ENST00000548524 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
USP15-208ENST00000548524 DZIP3Q86Y13 1208 aaKnown RBP12.46□□□□□ -0.41
USP15-208ENST00000548524 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
USP15-208ENST00000548524 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.41
USP15-208ENST00000548524 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.42
USP15-208ENST00000548524 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
USP15-208ENST00000548524 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
USP15-208ENST00000548524 SERPINB2P05120 415 aa12.45□□□□□ -0.42
USP15-208ENST00000548524 DPEP1P16444 411 aa12.45□□□□□ -0.42
USP15-208ENST00000548524 SIPA1L3O60292 1781 aaPredicted RBP12.44□□□□□ -0.42
USP15-208ENST00000548524 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
USP15-208ENST00000548524 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
USP15-208ENST00000548524 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
USP15-208ENST00000548524 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
USP15-208ENST00000548524 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
USP15-208ENST00000548524 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 NPHP1O15259 732 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
USP15-208ENST00000548524 NGEFQ8N5V2 710 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 ZNF652Q9Y2D9 606 aa12.43□□□□□ -0.42
USP15-208ENST00000548524 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
USP15-208ENST00000548524 APAF1O14727 1248 aa12.42□□□□□ -0.42
USP15-208ENST00000548524 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
USP15-208ENST00000548524 SETDB2Q96T68 719 aa12.42□□□□□ -0.42
USP15-208ENST00000548524 MYL6BP14649 208 aa12.41□□□□□ -0.42
USP15-208ENST00000548524 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
USP15-208ENST00000548524 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
USP15-208ENST00000548524 CHRNA5P30532 468 aa12.41□□□□□ -0.42
USP15-208ENST00000548524 CCDC184Q52MB2 194 aa12.41□□□□□ -0.42
USP15-208ENST00000548524 MRS2Q9HD23 443 aa12.41□□□□□ -0.42
USP15-208ENST00000548524 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
USP15-208ENST00000548524 CARMIL3Q8ND23 1372 aa12.41□□□□□ -0.42
USP15-208ENST00000548524 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
USP15-208ENST00000548524 CLEC4GQ6UXB4 293 aa12.4□□□□□ -0.42
USP15-208ENST00000548524 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
USP15-208ENST00000548524 CHL1O00533 1208 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 KCNA3P22001 575 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 ST5P78524 1137 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 CALD1Q05682 793 aaKnown RBP12.39□□□□□ -0.43
USP15-208ENST00000548524 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 ARHGAP27Q6ZUM4 889 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 C2CD5Q86YS7 1000 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
USP15-208ENST00000548524 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
USP15-208ENST00000548524 H0YIN7 160 aa12.38□□□□□ -0.43
USP15-208ENST00000548524 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
USP15-208ENST00000548524 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
USP15-208ENST00000548524 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
USP15-208ENST00000548524 NECTIN2Q92692 538 aa12.38□□□□□ -0.43
USP15-208ENST00000548524 NIP7Q9Y221 180 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP15-208ENST00000548524 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 HAX1O00165 279 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 RGL2O15211 777 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 PDE6BP35913 854 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 HLFQ16534 295 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 BRIP1Q9BX63 1249 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 MAP3K15Q6ZN16 1313 aa12.37□□□□□ -0.43
USP15-208ENST00000548524 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
USP15-208ENST00000548524 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
USP15-208ENST00000548524 TTLL6Q8N841 843 aa12.36□□□□□ -0.43
USP15-208ENST00000548524 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.434e-8■□□□□ 9.3
USP15-208ENST00000548524 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
USP15-208ENST00000548524 DLG5Q8TDM6 1919 aa12.36□□□□□ -0.43
USP15-208ENST00000548524 KDM3BQ7LBC6 1761 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 PYGBP11216 843 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 GTF2E1P29083 439 aaPredicted RBP12.35□□□□□ -0.43
USP15-208ENST00000548524 GNAI1P63096 354 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 UTRNP46939 3433 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
USP15-208ENST00000548524 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
USP15-208ENST00000548524 ANXA1P04083 346 aa12.34□□□□□ -0.43
USP15-208ENST00000548524 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
USP15-208ENST00000548524 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
USP15-208ENST00000548524 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 HOXB7P09629 217 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 GPTP24298 496 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
USP15-208ENST00000548524 PDIA6Q15084 440 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
USP15-208ENST00000548524 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP15-208ENST00000548524 GOLGB1Q14789 3259 aaKnown RBP12.33□□□□□ -0.44
USP15-208ENST00000548524 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
USP15-208ENST00000548524 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
USP15-208ENST00000548524 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms