RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 NGEFQ8N5V2 710 aa28.28■■■□□ 2.12
USP44-204ENST00000547951 RRP7AQ9Y3A4 280 aaKnown RBP28.28■■■□□ 2.12
USP44-204ENST00000547951 NFKBIEO00221 500 aa28.27■■■□□ 2.12
USP44-204ENST00000547951 RIPK4P57078 832 aa28.27■■■□□ 2.12
USP44-204ENST00000547951 CLEC4GQ6UXB4 293 aa28.27■■■□□ 2.12
USP44-204ENST00000547951 SLX4Q8IY92 1834 aa28.27■■■□□ 2.12
USP44-204ENST00000547951 NPHP1O15259 732 aa28.26■■■□□ 2.11
USP44-204ENST00000547951 TMPOP42166 694 aaKnown RBP28.25■■■□□ 2.11
USP44-204ENST00000547951 NBPF5PQ86XG9 351 aaPredicted RBP28.25■■■□□ 2.11
USP44-204ENST00000547951 NIP7Q9Y221 180 aaKnown RBP eCLIP28.25■■■□□ 2.11
USP44-204ENST00000547951 ZNF652Q9Y2D9 606 aa28.25■■■□□ 2.11
USP44-204ENST00000547951 FAM177BA6PVY3 158 aa28.24■■■□□ 2.11
USP44-204ENST00000547951 C21orf2O43822 256 aa28.24■■■□□ 2.11
USP44-204ENST00000547951 ST5P78524 1137 aa28.24■■■□□ 2.11
USP44-204ENST00000547951 TIAM2Q8IVF5 1701 aa28.23■■■□□ 2.11
USP44-204ENST00000547951 NUP98P52948 1817 aa28.23■■■□□ 2.11
USP44-204ENST00000547951 TTLL7Q6ZT98 887 aa28.23■■■□□ 2.11
USP44-204ENST00000547951 TSPYL4Q9UJ04 414 aa28.23■■■□□ 2.11
USP44-204ENST00000547951 FER1L6Q2WGJ9 1857 aa28.23■■■□□ 2.11
USP44-204ENST00000547951 SRGNP10124 158 aa28.22■■■□□ 2.11
USP44-204ENST00000547951 MYL6BP14649 208 aa28.22■■■□□ 2.11
USP44-204ENST00000547951 LMNB1P20700 586 aa28.22■■■□□ 2.11
USP44-204ENST00000547951 ARFGEF2Q9Y6D5 1785 aa28.22■■■□□ 2.11
USP44-204ENST00000547951 HSPA6P17066 643 aa28.21■■■□□ 2.11
USP44-204ENST00000547951 PDZRN3Q9UPQ7 1066 aa28.21■■■□□ 2.11
USP44-204ENST00000547951 NEUROD2Q15784 382 aa28.2■■■□□ 2.1
USP44-204ENST00000547951 TNRC6CQ9HCJ0 1690 aaKnown RBP28.19■■■□□ 2.1
USP44-204ENST00000547951 STYK1Q6J9G0 422 aa28.19■■■□□ 2.1
USP44-204ENST00000547951 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
USP44-204ENST00000547951 RRAGCQ9HB90 399 aa28.18■■■□□ 2.1
USP44-204ENST00000547951 MAP3K15Q6ZN16 1313 aa28.18■■■□□ 2.1
USP44-204ENST00000547951 RGL2O15211 777 aa28.17■■■□□ 2.1
USP44-204ENST00000547951 TOMM70O94826 608 aa28.17■■■□□ 2.1
USP44-204ENST00000547951 MASTLQ96GX5 879 aa28.17■■■□□ 2.1
USP44-204ENST00000547951 ZBTB3Q9H5J0 574 aa28.17■■■□□ 2.1
USP44-204ENST00000547951 PRKRIP1Q9H875 184 aaPredicted RBP28.17■■■□□ 2.1
USP44-204ENST00000547951 ADAMTS8Q9UP79 889 aa28.17■■■□□ 2.1
USP44-204ENST00000547951 KDM2BQ8NHM5 1336 aa28.17■■■□□ 2.1
USP44-204ENST00000547951 TRIM35Q9UPQ4 493 aa28.16■■■□□ 2.1
USP44-204ENST00000547951 ABCC12Q96J65 1359 aa28.15■■■□□ 2.1
USP44-204ENST00000547951 WDR43Q15061 677 aaKnown RBP eCLIP28.15■■■□□ 2.1
USP44-204ENST00000547951 PDIA6Q15084 440 aa28.15■■■□□ 2.1
USP44-204ENST00000547951 PROSER3Q2NL68 480 aa28.15■■■□□ 2.1
USP44-204ENST00000547951 TPTE2Q6XPS3 522 aa28.15■■■□□ 2.1
USP44-204ENST00000547951 LRP10Q7Z4F1 713 aa28.15■■■□□ 2.1
USP44-204ENST00000547951 CNKSR1Q969H4 720 aa28.15■■■□□ 2.1
USP44-204ENST00000547951 DICER1Q9UPY3 1922 aaKnown RBP28.14■■■□□ 2.1
USP44-204ENST00000547951 ERVV-1B6SEH8 477 aa28.14■■■□□ 2.1
USP44-204ENST00000547951 ANXA1P04083 346 aa28.14■■■□□ 2.1
USP44-204ENST00000547951 EIF2S2P20042 333 aaKnown RBP28.14■■■□□ 2.1
USP44-204ENST00000547951 GPTP24298 496 aa28.14■■■□□ 2.1
USP44-204ENST00000547951 KRT24Q2M2I5 525 aa28.14■■■□□ 2.1
USP44-204ENST00000547951 NUTM1Q86Y26 1132 aa28.14■■■□□ 2.1
USP44-204ENST00000547951 RUNDC1Q96C34 613 aa28.14■■■□□ 2.1
USP44-204ENST00000547951 UBN2Q6ZU65 1347 aa28.14■■■□□ 2.09
USP44-204ENST00000547951 KLRG2A4D1S0 409 aaPredicted RBP28.13■■■□□ 2.09
USP44-204ENST00000547951 OLFM4Q6UX06 510 aa28.13■■■□□ 2.09
USP44-204ENST00000547951 KIF6Q6ZMV9 814 aa28.13■■■□□ 2.09
USP44-204ENST00000547951 LMOD3Q0VAK6 560 aa28.12■■■□□ 2.09
USP44-204ENST00000547951 C7orf43Q8WVR3 580 aa28.12■■■□□ 2.09
USP44-204ENST00000547951 NECTIN2Q92692 538 aa28.12■■■□□ 2.09
USP44-204ENST00000547951 ZC3H4Q9UPT8 1303 aaKnown RBP28.12■■■□□ 2.09
USP44-204ENST00000547951 NPR1P16066 1061 aa28.11■■■□□ 2.09
USP44-204ENST00000547951 ERFEQ4G0M1 354 aa28.1■■■□□ 2.09
USP44-204ENST00000547951 BABAM1Q9NWV8 329 aa28.1■■■□□ 2.09
USP44-204ENST00000547951 ERBB4Q15303 1308 aa28.1■■■□□ 2.09
USP44-204ENST00000547951 GLTPD2A6NH11 291 aa28.09■■■□□ 2.09
USP44-204ENST00000547951 RBM46Q8TBY0 533 aaKnown RBP28.09■■■□□ 2.09
USP44-204ENST00000547951 TAOK3Q9H2K8 898 aa28.09■■■□□ 2.09
USP44-204ENST00000547951 LAS1LQ9Y4W2 734 aaKnown RBP28.09■■■□□ 2.09
USP44-204ENST00000547951 CHL1O00533 1208 aa28.08■■■□□ 2.09
USP44-204ENST00000547951 GTF2E1P29083 439 aaPredicted RBP28.08■■■□□ 2.09
USP44-204ENST00000547951 SUSD4Q5VX71 490 aa28.08■■■□□ 2.09
USP44-204ENST00000547951 C16orf71Q8IYS4 520 aaPredicted RBP28.08■■■□□ 2.09
USP44-204ENST00000547951 LTBP3Q9NS15 1303 aa28.08■■■□□ 2.09
USP44-204ENST00000547951 ZNF34Q8IZ26 560 aa28.07■■■□□ 2.08
USP44-204ENST00000547951 GIGYF2Q6Y7W6 1299 aaKnown RBP28.05■■■□□ 2.08
USP44-204ENST00000547951 SLC51AQ86UW1 340 aa28.05■■■□□ 2.08
USP44-204ENST00000547951 C3orf67Q6ZVT6 689 aa28.04■■■□□ 2.08
USP44-204ENST00000547951 NYXQ9GZU5 481 aa28.04■■■□□ 2.08
USP44-204ENST00000547951 POTECB2RU33 542 aa28.03■■■□□ 2.08
USP44-204ENST00000547951 NTSR2O95665 410 aa28.03■■■□□ 2.08
USP44-204ENST00000547951 CRY2Q49AN0 593 aa28.03■■■□□ 2.08
USP44-204ENST00000547951 IBTKQ9P2D0 1353 aaPredicted RBP28.02■■■□□ 2.08
USP44-204ENST00000547951 WDR90Q96KV7 1748 aa28.02■■■□□ 2.08
USP44-204ENST00000547951 HTRA3P83110 453 aa28.02■■■□□ 2.08
USP44-204ENST00000547951 CCDC93Q567U6 631 aa28.02■■■□□ 2.08
USP44-204ENST00000547951 SOGA3Q5TF21 947 aa28.02■■■□□ 2.08
USP44-204ENST00000547951 ANKRD36CQ5JPF3 1778 aa28.01■■■□□ 2.08
USP44-204ENST00000547951 APLP1P51693 650 aa28.01■■■□□ 2.07
USP44-204ENST00000547951 AIMP1Q12904 312 aaKnown RBP28.01■■■□□ 2.07
USP44-204ENST00000547951 COPS6Q7L5N1 327 aa28.01■■■□□ 2.07
USP44-204ENST00000547951 XAGE3Q8WTP9 111 aa28.01■■■□□ 2.07
USP44-204ENST00000547951 CCDC184Q52MB2 194 aa28■■■□□ 2.07
USP44-204ENST00000547951 ZNF277Q9NRM2 450 aaPredicted RBP28■■■□□ 2.07
USP44-204ENST00000547951 APAF1O14727 1248 aa27.99■■■□□ 2.07
USP44-204ENST00000547951 VEGFAP15692 232 aaPredicted RBP27.99■■■□□ 2.07
USP44-204ENST00000547951 FSTL1Q12841 308 aa27.99■■■□□ 2.07
USP44-204ENST00000547951 CHPF2Q9P2E5 772 aa27.99■■■□□ 2.07
USP44-204ENST00000547951 RIC1Q4ADV7 1423 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms