RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 HCN2Q9UL51 889 aa5.83□□□□□ -1.48
DEPDC4-204ENST00000547823 NRG1Q02297 640 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-204ENST00000547823 LRP8Q14114 963 aa5.82□□□□□ -1.48
DEPDC4-204ENST00000547823 EFCC1Q9HA90 598 aa5.82□□□□□ -1.48
DEPDC4-204ENST00000547823 SCHIP1Q9P0W5 487 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-204ENST00000547823 ANKIB1Q9P2G1 1089 aa5.82□□□□□ -1.48
DEPDC4-204ENST00000547823 NOD1Q9Y239 953 aa5.82□□□□□ -1.48
DEPDC4-204ENST00000547823 EML1O00423 815 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 ADH7P40394 386 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 VAC14Q08AM6 782 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 NFATC2IPQ8NCF5 419 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 L3MBTL2Q969R5 705 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 STRN4Q9NRL3 753 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 CHMP3Q9Y3E7 222 aa5.81□□□□□ -1.48
DEPDC4-204ENST00000547823 NID1P14543 1247 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 ELNP15502 786 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 RAC1P63000 192 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 PRSS36Q5K4E3 855 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 LRRC69Q6ZNQ3 347 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 MICALL1Q8N3F8 863 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 PCDHGA11Q9Y5H2 935 aa5.8□□□□□ -1.48
DEPDC4-204ENST00000547823 LILRB5O75023 590 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 ALBP02768 609 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 NOS2P35228 1153 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 TXLNAP40222 546 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 KCNQ4P56696 695 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 PSME1Q06323 249 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 SPEM2Q0P670 501 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 ADGRE1Q14246 886 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 HIF1AQ16665 826 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 FOXD4L6Q3SYB3 417 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 C1orf53Q5VUE5 145 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 FOXD4L3Q6VB84 417 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 TXNRD3Q86VQ6 643 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 RHPN1Q8TCX5 695 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 ZNF232Q9UNY5 417 aa5.79□□□□□ -1.48
DEPDC4-204ENST00000547823 SERTM1A2A2V5 107 aa5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 BRPF1P55201 1214 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 GTF2IP78347 998 aa5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 COL9A3Q14050 684 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 ZNF358Q9NW07 568 aa5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 STARD13Q9Y3M8 1113 aa5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 USP3Q9Y6I4 520 aa5.78□□□□□ -1.48
DEPDC4-204ENST00000547823 HIRAP54198 1017 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 PSMA6P60900 246 aaKnown RBP5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 MBTPS1Q14703 1052 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 TRAPPC3LQ5T215 181 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 C20orf204Q6ZNR8 217 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 TRIM50Q86XT4 487 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 WWC1Q8IX03 1113 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 ZDHHC1Q8WTX9 485 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 LENG1Q96BZ8 264 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 KCNH4Q9UQ05 1017 aa5.77□□□□□ -1.49
DEPDC4-204ENST00000547823 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 ABL2P42684 1182 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 EPHA4P54764 986 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 SLC9A9Q8IVB4 645 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 SLC30A3Q99726 388 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 BRD7Q9NPI1 651 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 PARP3Q9Y6F1 533 aa5.76□□□□□ -1.49
DEPDC4-204ENST00000547823 ATP1A2P50993 1020 aa5.75□□□□□ -1.49
DEPDC4-204ENST00000547823 SFSWAPQ12872 951 aaKnown RBP5.75□□□□□ -1.49
DEPDC4-204ENST00000547823 GRIK4Q16099 956 aa5.75□□□□□ -1.49
DEPDC4-204ENST00000547823 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
DEPDC4-204ENST00000547823 CEP63Q96MT8 703 aa5.75□□□□□ -1.49
DEPDC4-204ENST00000547823 GDPD2Q9HCC8 539 aa5.75□□□□□ -1.49
DEPDC4-204ENST00000547823 A0A0A0MRY4 1105 aa5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 SKIP12755 728 aa5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 PCSK7Q16549 785 aa5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 POTEAQ6S8J7 498 aa5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 DTWD1Q8N5C7 304 aa5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.74□□□□□ -1.49
DEPDC4-204ENST00000547823 M0R2N6 131 aa5.73□□□□□ -1.49
DEPDC4-204ENST00000547823 TYRO3Q06418 890 aa5.73□□□□□ -1.49
DEPDC4-204ENST00000547823 SLC51AQ86UW1 340 aa5.73□□□□□ -1.49
DEPDC4-204ENST00000547823 C7orf43Q8WVR3 580 aa5.73□□□□□ -1.49
DEPDC4-204ENST00000547823 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
DEPDC4-204ENST00000547823 UBE2OQ9C0C9 1292 aaKnown RBP5.73□□□□□ -1.49
DEPDC4-204ENST00000547823 SELPP16109 830 aa5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 NCOA4Q13772 614 aa5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 C8orf86Q6ZUL3 223 aa5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 TP53INP1Q96A56 240 aa5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 JPH1Q9HDC5 661 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 USP21Q9UK80 565 aa5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 SLC6A14Q9UN76 642 aa5.72□□□□□ -1.49
DEPDC4-204ENST00000547823 HYAL3O43820 417 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-204ENST00000547823 SLC24A1O60721 1099 aa5.71□□□□□ -1.5
DEPDC4-204ENST00000547823 FMR1NBQ8N0W7 255 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-204ENST00000547823 BHMTQ93088 406 aa5.71□□□□□ -1.5
DEPDC4-204ENST00000547823 RNF112Q9ULX5 631 aa5.71□□□□□ -1.5
DEPDC4-204ENST00000547823 USP17L5A8MUK1 530 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 PIK3CDO00329 1044 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 IER5Q5VY09 327 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 RAB44Q7Z6P3 723 aaPredicted RBP5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 PLEKHM2Q8IWE5 1019 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 TNS4Q8IZW8 715 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 STAG2Q8N3U4 1231 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 DCAF11Q8TEB1 546 aa5.7□□□□□ -1.5
DEPDC4-204ENST00000547823 SUSD3Q96L08 255 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 620.1 ms