RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PXDNLA1KZ92 1463 aa24.3■■□□□ 1.48
PRPF40B-206ENST00000547764 AFDNP55196 1824 aaKnown RBP24.3■■□□□ 1.48
PRPF40B-206ENST00000547764 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 A0A0G2JLW4 131 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 ERVV-1B6SEH8 477 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 ELL2O00472 640 aaPredicted RBP24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 YBX3P16989 372 aaKnown RBP eCLIP24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 KIF6Q6ZMV9 814 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 WDR63Q8IWG1 891 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 C8orf58Q8NAV2 365 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 DDX21Q9NR30 783 aaKnown RBP eCLIP24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 NRXN2Q9P2S2 1712 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 MAP3K15Q6ZN16 1313 aa24.29■■□□□ 1.48
PRPF40B-206ENST00000547764 GOLGB1Q14789 3259 aaKnown RBP24.28■■□□□ 1.48
PRPF40B-206ENST00000547764 DPEP1P16444 411 aa24.28■■□□□ 1.48
PRPF40B-206ENST00000547764 CHPF2Q9P2E5 772 aa24.28■■□□□ 1.48
PRPF40B-206ENST00000547764 WWC3Q9ULE0 1092 aa24.28■■□□□ 1.48
PRPF40B-206ENST00000547764 KIAA1551Q9HCM1 1747 aa24.27■■□□□ 1.48
PRPF40B-206ENST00000547764 UTRNP46939 3433 aa24.27■■□□□ 1.48
PRPF40B-206ENST00000547764 ZBTB3Q9H5J0 574 aa24.27■■□□□ 1.48
PRPF40B-206ENST00000547764 MIER1Q8N108 512 aa24.26■■□□□ 1.47
PRPF40B-206ENST00000547764 NIP7Q9Y221 180 aaKnown RBP eCLIP24.26■■□□□ 1.47
PRPF40B-206ENST00000547764 N4BP2Q86UW6 1770 aaPredicted RBP24.26■■□□□ 1.47
PRPF40B-206ENST00000547764 PRR5LQ6MZQ0 368 aa24.25■■□□□ 1.47
PRPF40B-206ENST00000547764 COPS6Q7L5N1 327 aa24.25■■□□□ 1.47
PRPF40B-206ENST00000547764 TSPYL6Q8N831 410 aa24.25■■□□□ 1.47
PRPF40B-206ENST00000547764 DBF4Q9UBU7 674 aaPredicted RBP24.25■■□□□ 1.47
PRPF40B-206ENST00000547764 KCNA3P22001 575 aa24.24■■□□□ 1.47
PRPF40B-206ENST00000547764 AIMP1Q12904 312 aaKnown RBP24.24■■□□□ 1.47
PRPF40B-206ENST00000547764 XAGE3Q8WTP9 111 aa24.24■■□□□ 1.47
PRPF40B-206ENST00000547764 CHRNA5P30532 468 aa24.23■■□□□ 1.47
PRPF40B-206ENST00000547764 CCDC24Q8N4L8 307 aa24.23■■□□□ 1.47
PRPF40B-206ENST00000547764 CNBD1Q8NA66 436 aa24.23■■□□□ 1.47
PRPF40B-206ENST00000547764 GIGYF2Q6Y7W6 1299 aaKnown RBP24.22■■□□□ 1.47
PRPF40B-206ENST00000547764 NBPF5PQ86XG9 351 aaPredicted RBP24.22■■□□□ 1.47
PRPF40B-206ENST00000547764 SPINK5Q9NQ38 1064 aaPredicted RBP24.22■■□□□ 1.47
PRPF40B-206ENST00000547764 NUP98P52948 1817 aa24.21■■□□□ 1.47
PRPF40B-206ENST00000547764 FANCIQ9NVI1 1328 aa24.21■■□□□ 1.47
PRPF40B-206ENST00000547764 NPHP1O15259 732 aa24.21■■□□□ 1.47
PRPF40B-206ENST00000547764 GRIN3BO60391 1043 aa24.21■■□□□ 1.47
PRPF40B-206ENST00000547764 ATP10DQ9P241 1426 aa24.2■■□□□ 1.46
PRPF40B-206ENST00000547764 BRIP1Q9BX63 1249 aa24.2■■□□□ 1.46
PRPF40B-206ENST00000547764 HYPKQ9NX55 129 aa24.2■■□□□ 1.46
PRPF40B-206ENST00000547764 ZNF521Q96K83 1311 aa24.19■■□□□ 1.46
PRPF40B-206ENST00000547764 FAM177BA6PVY3 158 aa24.19■■□□□ 1.46
PRPF40B-206ENST00000547764 GPTP24298 496 aa24.19■■□□□ 1.46
PRPF40B-206ENST00000547764 TPTE2Q6XPS3 522 aa24.19■■□□□ 1.46
PRPF40B-206ENST00000547764 PIM2Q9P1W9 311 aa24.19■■□□□ 1.46
PRPF40B-206ENST00000547764 ST5P78524 1137 aa24.18■■□□□ 1.46
PRPF40B-206ENST00000547764 TWISTNBQ3B726 338 aaPredicted RBP24.18■■□□□ 1.46
PRPF40B-206ENST00000547764 ZNF34Q8IZ26 560 aa24.18■■□□□ 1.46
PRPF40B-206ENST00000547764 CHMP4AQ9BY43 222 aa24.18■■□□□ 1.46
PRPF40B-206ENST00000547764 BCS1LQ9Y276 419 aa24.18■■□□□ 1.46
PRPF40B-206ENST00000547764 UBN2Q6ZU65 1347 aa24.17■■□□□ 1.46
PRPF40B-206ENST00000547764 GOLGA2Q08379 1002 aa24.17■■□□□ 1.46
PRPF40B-206ENST00000547764 CCDC30Q5VVM6 783 aa24.17■■□□□ 1.46
PRPF40B-206ENST00000547764 C2CD5Q86YS7 1000 aa24.17■■□□□ 1.46
PRPF40B-206ENST00000547764 BRCA1P38398 1863 aaKnown RBP24.16■■□□□ 1.46
PRPF40B-206ENST00000547764 ANKRD31Q8N7Z5 1873 aa24.16■■□□□ 1.46
PRPF40B-206ENST00000547764 H0YIN7 160 aa24.16■■□□□ 1.46
PRPF40B-206ENST00000547764 PDE6BP35913 854 aa24.16■■□□□ 1.46
PRPF40B-206ENST00000547764 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
PRPF40B-206ENST00000547764 ANKRD13DQ6ZTN6 518 aa24.15■■□□□ 1.46
PRPF40B-206ENST00000547764 PLBD2Q8NHP8 589 aa24.15■■□□□ 1.46
PRPF40B-206ENST00000547764 PHAXQ9H814 394 aaKnown RBP24.15■■□□□ 1.46
PRPF40B-206ENST00000547764 YY1P25490 414 aa24.14■■□□□ 1.45
PRPF40B-206ENST00000547764 EXOSC9Q06265 439 aaKnown RBP24.14■■□□□ 1.45
PRPF40B-206ENST00000547764 DALRD3Q5D0E6 543 aaKnown RBP24.14■■□□□ 1.45
PRPF40B-206ENST00000547764 SUSD4Q5VX71 490 aa24.14■■□□□ 1.45
PRPF40B-206ENST00000547764 NYXQ9GZU5 481 aa24.14■■□□□ 1.45
PRPF40B-206ENST00000547764 PDZRN3Q9UPQ7 1066 aa24.14■■□□□ 1.45
PRPF40B-206ENST00000547764 GTF2E1P29083 439 aaPredicted RBP24.13■■□□□ 1.45
PRPF40B-206ENST00000547764 TCIRG1Q13488 830 aa24.13■■□□□ 1.45
PRPF40B-206ENST00000547764 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
PRPF40B-206ENST00000547764 TCERG1O14776 1098 aaKnown RBP24.12■■□□□ 1.45
PRPF40B-206ENST00000547764 PARP10Q53GL7 1025 aa24.12■■□□□ 1.45
PRPF40B-206ENST00000547764 NUTM1Q86Y26 1132 aa24.12■■□□□ 1.45
PRPF40B-206ENST00000547764 CHD4Q14839 1912 aa24.12■■□□□ 1.45
PRPF40B-206ENST00000547764 VAMP4O75379 141 aa24.11■■□□□ 1.45
PRPF40B-206ENST00000547764 STK31Q9BXU1 1019 aa24.11■■□□□ 1.45
PRPF40B-206ENST00000547764 IBTKQ9P2D0 1353 aaPredicted RBP24.11■■□□□ 1.45
PRPF40B-206ENST00000547764 NTSR2O95665 410 aa24.1■■□□□ 1.45
PRPF40B-206ENST00000547764 ERFEQ4G0M1 354 aa24.1■■□□□ 1.45
PRPF40B-206ENST00000547764 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
PRPF40B-206ENST00000547764 ZNF622Q969S3 477 aaKnown RBP eCLIP24.1■■□□□ 1.45
PRPF40B-206ENST00000547764 DLEC1Q9Y238 1755 aa24.1■■□□□ 1.45
PRPF40B-206ENST00000547764 SRGNP10124 158 aa24.09■■□□□ 1.45
PRPF40B-206ENST00000547764 NLRP10Q86W26 655 aa24.09■■□□□ 1.45
PRPF40B-206ENST00000547764 TTLL6Q8N841 843 aa24.09■■□□□ 1.45
PRPF40B-206ENST00000547764 ABCC12Q96J65 1359 aa24.08■■□□□ 1.45
PRPF40B-206ENST00000547764 COL11A2P13942 1736 aaPredicted RBP24.08■■□□□ 1.45
PRPF40B-206ENST00000547764 KLRG2A4D1S0 409 aaPredicted RBP24.08■■□□□ 1.45
PRPF40B-206ENST00000547764 RIC3Q7Z5B4 369 aa24.08■■□□□ 1.45
PRPF40B-206ENST00000547764 UTP14AQ9BVJ6 771 aaKnown RBP24.08■■□□□ 1.45
PRPF40B-206ENST00000547764 ANKRD36CQ5JPF3 1778 aa24.07■■□□□ 1.44
PRPF40B-206ENST00000547764 SLC4A2P04920 1241 aa24.07■■□□□ 1.44
PRPF40B-206ENST00000547764 ARHGAP27Q6ZUM4 889 aa24.07■■□□□ 1.44
PRPF40B-206ENST00000547764 ARFGEF1Q9Y6D6 1849 aa24.07■■□□□ 1.44
PRPF40B-206ENST00000547764 E9PSI1 815 aa24.06■■□□□ 1.44
PRPF40B-206ENST00000547764 STYK1Q6J9G0 422 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms