RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 ERVV-1B6SEH8 477 aa16.21■□□□□ 0.19
SSH1-206ENST00000547381 CHL1O00533 1208 aa16.21■□□□□ 0.19
SSH1-206ENST00000547381 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
SSH1-206ENST00000547381 NBPF5PQ86XG9 351 aaPredicted RBP16.21■□□□□ 0.19
SSH1-206ENST00000547381 MYL6BP14649 208 aa16.2■□□□□ 0.18
SSH1-206ENST00000547381 TPTE2Q6XPS3 522 aa16.2■□□□□ 0.18
SSH1-206ENST00000547381 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
SSH1-206ENST00000547381 ANP32CO43423 234 aa16.19■□□□□ 0.18
SSH1-206ENST00000547381 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
SSH1-206ENST00000547381 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
SSH1-206ENST00000547381 GPBP1L1Q9HC44 474 aaPredicted RBP16.19■□□□□ 0.18
SSH1-206ENST00000547381 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
SSH1-206ENST00000547381 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
SSH1-206ENST00000547381 DLEC1Q9Y238 1755 aa16.18■□□□□ 0.18
SSH1-206ENST00000547381 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
SSH1-206ENST00000547381 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSH1-206ENST00000547381 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
SSH1-206ENST00000547381 APAF1O14727 1248 aa16.17■□□□□ 0.18
SSH1-206ENST00000547381 HLFQ16534 295 aa16.17■□□□□ 0.18
SSH1-206ENST00000547381 CEP350Q5VT06 3117 aa16.17■□□□□ 0.18
SSH1-206ENST00000547381 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
SSH1-206ENST00000547381 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
SSH1-206ENST00000547381 CCDC24Q8N4L8 307 aa16.16■□□□□ 0.18
SSH1-206ENST00000547381 CNKSR1Q969H4 720 aa16.16■□□□□ 0.18
SSH1-206ENST00000547381 NYXQ9GZU5 481 aa16.16■□□□□ 0.18
SSH1-206ENST00000547381 HOXB7P09629 217 aa16.15■□□□□ 0.18
SSH1-206ENST00000547381 SRGNP10124 158 aa16.15■□□□□ 0.18
SSH1-206ENST00000547381 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
SSH1-206ENST00000547381 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
SSH1-206ENST00000547381 C9orf131Q5VYM1 1079 aa16.15■□□□□ 0.18
SSH1-206ENST00000547381 STYK1Q6J9G0 422 aa16.15■□□□□ 0.18
SSH1-206ENST00000547381 ZNF526Q8TF50 670 aaPredicted RBP16.15■□□□□ 0.18
SSH1-206ENST00000547381 MASTLQ96GX5 879 aa16.15■□□□□ 0.18
SSH1-206ENST00000547381 PDIA6Q15084 440 aa16.14■□□□□ 0.17
SSH1-206ENST00000547381 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
SSH1-206ENST00000547381 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
SSH1-206ENST00000547381 KLRG2A4D1S0 409 aaPredicted RBP16.13■□□□□ 0.17
SSH1-206ENST00000547381 GNAI1P63096 354 aa16.13■□□□□ 0.17
SSH1-206ENST00000547381 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
SSH1-206ENST00000547381 LRP10Q7Z4F1 713 aa16.13■□□□□ 0.17
SSH1-206ENST00000547381 DDX21Q9NR30 783 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSH1-206ENST00000547381 RNF181Q9P0P0 153 aa16.13■□□□□ 0.17
SSH1-206ENST00000547381 NUP98P52948 1817 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 NPR1P16066 1061 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 LMNB1P20700 586 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
SSH1-206ENST00000547381 IBTKQ9P2D0 1353 aaPredicted RBP16.12■□□□□ 0.17
SSH1-206ENST00000547381 COL11A2P13942 1736 aaPredicted RBP16.11■□□□□ 0.17
SSH1-206ENST00000547381 C21orf2O43822 256 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 PARP10Q53GL7 1025 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 COPS6Q7L5N1 327 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 ZNF34Q8IZ26 560 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
SSH1-206ENST00000547381 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
SSH1-206ENST00000547381 GPTP24298 496 aa16.1■□□□□ 0.17
SSH1-206ENST00000547381 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
SSH1-206ENST00000547381 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
SSH1-206ENST00000547381 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
SSH1-206ENST00000547381 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
SSH1-206ENST00000547381 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
SSH1-206ENST00000547381 ANXA1P04083 346 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
SSH1-206ENST00000547381 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 UBN2Q6ZU65 1347 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 SBF1O95248 1867 aa16.09■□□□□ 0.17
SSH1-206ENST00000547381 RASSF7Q02833 373 aa16.08■□□□□ 0.16
SSH1-206ENST00000547381 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.16
SSH1-206ENST00000547381 ERFEQ4G0M1 354 aa16.08■□□□□ 0.16
SSH1-206ENST00000547381 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
SSH1-206ENST00000547381 NUTM1Q86Y26 1132 aa16.08■□□□□ 0.16
SSH1-206ENST00000547381 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
SSH1-206ENST00000547381 NFKBIEO00221 500 aa16.07■□□□□ 0.16
SSH1-206ENST00000547381 CRY2Q49AN0 593 aa16.07■□□□□ 0.16
SSH1-206ENST00000547381 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
SSH1-206ENST00000547381 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
SSH1-206ENST00000547381 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
SSH1-206ENST00000547381 RIC1Q4ADV7 1423 aa16.07■□□□□ 0.16
SSH1-206ENST00000547381 SLX4Q8IY92 1834 aa16.06■□□□□ 0.16
SSH1-206ENST00000547381 ARFGEF2Q9Y6D5 1785 aa16.06■□□□□ 0.16
SSH1-206ENST00000547381 KIF3CO14782 793 aa16.06■□□□□ 0.16
SSH1-206ENST00000547381 NTSR2O95665 410 aa16.06■□□□□ 0.16
SSH1-206ENST00000547381 UTP14AQ9BVJ6 771 aaKnown RBP16.06■□□□□ 0.16
SSH1-206ENST00000547381 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
SSH1-206ENST00000547381 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
SSH1-206ENST00000547381 TCIRG1Q13488 830 aa16.05■□□□□ 0.16
SSH1-206ENST00000547381 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
SSH1-206ENST00000547381 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms