RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 TWISTNBQ3B726 338 aaPredicted RBP32.78■■■□□ 2.84
NKX2-1-205ENST00000546983 C8orf58Q8NAV2 365 aa32.78■■■□□ 2.84
NKX2-1-205ENST00000546983 STK31Q9BXU1 1019 aa32.78■■■□□ 2.84
NKX2-1-205ENST00000546983 PDZRN3Q9UPQ7 1066 aa32.78■■■□□ 2.84
NKX2-1-205ENST00000546983 DDR1Q08345 913 aa32.77■■■□□ 2.84
NKX2-1-205ENST00000546983 HSP90AB3PQ58FF7 597 aa32.77■■■□□ 2.84
NKX2-1-205ENST00000546983 TBC1D9BQ66K14 1250 aa32.77■■■□□ 2.84
NKX2-1-205ENST00000546983 NECTIN2Q92692 538 aa32.77■■■□□ 2.84
NKX2-1-205ENST00000546983 CHPF2Q9P2E5 772 aa32.77■■■□□ 2.84
NKX2-1-205ENST00000546983 C10orf71Q711Q0 1435 aa32.77■■■□□ 2.84
NKX2-1-205ENST00000546983 SENP3-EIF4A1A0A087X0R7 540 aa32.76■■■□□ 2.83
NKX2-1-205ENST00000546983 LRP10Q7Z4F1 713 aa32.76■■■□□ 2.83
NKX2-1-205ENST00000546983 ELL2O00472 640 aaPredicted RBP32.75■■■□□ 2.83
NKX2-1-205ENST00000546983 GIGYF2Q6Y7W6 1299 aaKnown RBP32.75■■■□□ 2.83
NKX2-1-205ENST00000546983 BCORQ6W2J9 1755 aa32.74■■■□□ 2.83
NKX2-1-205ENST00000546983 NPHP1O15259 732 aa32.74■■■□□ 2.83
NKX2-1-205ENST00000546983 BICDL1Q6ZP65 573 aa32.74■■■□□ 2.83
NKX2-1-205ENST00000546983 COPS6Q7L5N1 327 aa32.74■■■□□ 2.83
NKX2-1-205ENST00000546983 NIP7Q9Y221 180 aaKnown RBP eCLIP32.73■■■□□ 2.83
NKX2-1-205ENST00000546983 ATP10DQ9P241 1426 aa32.72■■■□□ 2.83
NKX2-1-205ENST00000546983 TPTE2Q6XPS3 522 aa32.72■■■□□ 2.83
NKX2-1-205ENST00000546983 TTLL7Q6ZT98 887 aa32.72■■■□□ 2.83
NKX2-1-205ENST00000546983 XAGE3Q8WTP9 111 aa32.72■■■□□ 2.83
NKX2-1-205ENST00000546983 NYXQ9GZU5 481 aa32.72■■■□□ 2.83
NKX2-1-205ENST00000546983 PROSER3Q2NL68 480 aa32.71■■■□□ 2.83
NKX2-1-205ENST00000546983 DDX58O95786 925 aaKnown RBP32.7■■■□□ 2.83
NKX2-1-205ENST00000546983 ST5P78524 1137 aa32.7■■■□□ 2.83
NKX2-1-205ENST00000546983 PARP10Q53GL7 1025 aa32.7■■■□□ 2.83
NKX2-1-205ENST00000546983 CNBD1Q8NA66 436 aa32.7■■■□□ 2.83
NKX2-1-205ENST00000546983 PLBD2Q8NHP8 589 aa32.7■■■□□ 2.83
NKX2-1-205ENST00000546983 ANKRD13DQ6ZTN6 518 aa32.69■■■□□ 2.82
NKX2-1-205ENST00000546983 NBPF5PQ86XG9 351 aaPredicted RBP32.69■■■□□ 2.82
NKX2-1-205ENST00000546983 TSPYL6Q8N831 410 aa32.69■■■□□ 2.82
NKX2-1-205ENST00000546983 ZBTB3Q9H5J0 574 aa32.69■■■□□ 2.82
NKX2-1-205ENST00000546983 AIMP1Q12904 312 aaKnown RBP32.68■■■□□ 2.82
NKX2-1-205ENST00000546983 HLFQ16534 295 aa32.68■■■□□ 2.82
NKX2-1-205ENST00000546983 IBTKQ9P2D0 1353 aaPredicted RBP32.68■■■□□ 2.82
NKX2-1-205ENST00000546983 ANXA1P04083 346 aa32.67■■■□□ 2.82
NKX2-1-205ENST00000546983 PDE6BP35913 854 aa32.67■■■□□ 2.82
NKX2-1-205ENST00000546983 EXOSC9Q06265 439 aaKnown RBP32.67■■■□□ 2.82
NKX2-1-205ENST00000546983 NLGN2Q8NFZ4 835 aa32.67■■■□□ 2.82
NKX2-1-205ENST00000546983 PPP1R42Q7Z4L9 355 aa32.66■■■□□ 2.82
NKX2-1-205ENST00000546983 ZNF428Q96B54 188 aa32.66■■■□□ 2.82
NKX2-1-205ENST00000546983 BRIP1Q9BX63 1249 aa32.66■■■□□ 2.82
NKX2-1-205ENST00000546983 RNF123Q5XPI4 1314 aa32.65■■■□□ 2.82
NKX2-1-205ENST00000546983 NRXN2Q9P2S2 1712 aa32.65■■■□□ 2.82
NKX2-1-205ENST00000546983 GRIN3BO60391 1043 aa32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 VAMP4O75379 141 aa32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 GTF2E1P29083 439 aaPredicted RBP32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 SLFN5Q08AF3 891 aa32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 GPR162Q16538 588 aa32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 ZNF34Q8IZ26 560 aa32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 SPINK5Q9NQ38 1064 aaPredicted RBP32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 KIF13BQ9NQT8 1826 aa32.64■■■□□ 2.82
NKX2-1-205ENST00000546983 PRR5LQ6MZQ0 368 aa32.63■■■□□ 2.81
NKX2-1-205ENST00000546983 CT47B1P0C2W7 299 aaPredicted RBP32.62■■■□□ 2.81
NKX2-1-205ENST00000546983 TCIRG1Q13488 830 aa32.62■■■□□ 2.81
NKX2-1-205ENST00000546983 PXDNLA1KZ92 1463 aa32.61■■■□□ 2.81
NKX2-1-205ENST00000546983 H0YIN7 160 aa32.6■■■□□ 2.81
NKX2-1-205ENST00000546983 RIC3Q7Z5B4 369 aa32.6■■■□□ 2.81
NKX2-1-205ENST00000546983 SLC4A2P04920 1241 aa32.59■■■□□ 2.81
NKX2-1-205ENST00000546983 PIM2Q9P1W9 311 aa32.59■■■□□ 2.81
NKX2-1-205ENST00000546983 HNRNPUQ00839 825 aaKnown RBP eCLIP32.58■■■□□ 2.81
NKX2-1-205ENST00000546983 TRIM28Q13263 835 aaKnown RBP32.57■■■□□ 2.8
NKX2-1-205ENST00000546983 DPEP1P16444 411 aa32.56■■■□□ 2.8
NKX2-1-205ENST00000546983 PHAXQ9H814 394 aaKnown RBP32.56■■■□□ 2.8
NKX2-1-205ENST00000546983 A0A0G2JLW4 131 aa32.55■■■□□ 2.8
NKX2-1-205ENST00000546983 GPTP24298 496 aa32.55■■■□□ 2.8
NKX2-1-205ENST00000546983 TRMT2AQ8IZ69 625 aaKnown RBP32.55■■■□□ 2.8
NKX2-1-205ENST00000546983 PELP1Q8IZL8 1130 aaKnown RBP32.55■■■□□ 2.8
NKX2-1-205ENST00000546983 UTP14AQ9BVJ6 771 aaKnown RBP32.55■■■□□ 2.8
NKX2-1-205ENST00000546983 NUP98P52948 1817 aa32.54■■■□□ 2.8
NKX2-1-205ENST00000546983 AFDNP55196 1824 aaKnown RBP32.54■■■□□ 2.8
NKX2-1-205ENST00000546983 HSP90B1P14625 803 aaKnown RBP32.54■■■□□ 2.8
NKX2-1-205ENST00000546983 KSR2Q6VAB6 950 aa32.54■■■□□ 2.8
NKX2-1-205ENST00000546983 RIC1Q4ADV7 1423 aa32.53■■■□□ 2.8
NKX2-1-205ENST00000546983 NEXNQ0ZGT2 675 aa32.53■■■□□ 2.8
NKX2-1-205ENST00000546983 C2CD5Q86YS7 1000 aa32.53■■■□□ 2.8
NKX2-1-205ENST00000546983 UBN2Q6ZU65 1347 aa32.52■■■□□ 2.8
NKX2-1-205ENST00000546983 DALRD3Q5D0E6 543 aaKnown RBP32.52■■■□□ 2.8
NKX2-1-205ENST00000546983 SUSD4Q5VX71 490 aa32.51■■■□□ 2.79
NKX2-1-205ENST00000546983 NLRP10Q86W26 655 aa32.51■■■□□ 2.79
NKX2-1-205ENST00000546983 KLRG2A4D1S0 409 aaPredicted RBP32.5■■■□□ 2.79
NKX2-1-205ENST00000546983 FLIIQ13045 1269 aa32.5■■■□□ 2.79
NKX2-1-205ENST00000546983 ISCA1Q9BUE6 129 aa32.5■■■□□ 2.79
NKX2-1-205ENST00000546983 METTL22Q9BUU2 404 aaPredicted RBP32.5■■■□□ 2.79
NKX2-1-205ENST00000546983 NTSR2O95665 410 aa32.49■■■□□ 2.79
NKX2-1-205ENST00000546983 KCNA3P22001 575 aa32.49■■■□□ 2.79
NKX2-1-205ENST00000546983 STYK1Q6J9G0 422 aa32.49■■■□□ 2.79
NKX2-1-205ENST00000546983 TTLL6Q8N841 843 aa32.49■■■□□ 2.79
NKX2-1-205ENST00000546983 CNKSR1Q969H4 720 aa32.49■■■□□ 2.79
NKX2-1-205ENST00000546983 CACNA1FO60840 1977 aa32.49■■■□□ 2.79
NKX2-1-205ENST00000546983 FAM177BA6PVY3 158 aa32.48■■■□□ 2.79
NKX2-1-205ENST00000546983 CCDC191Q8NCU4 936 aa32.48■■■□□ 2.79
NKX2-1-205ENST00000546983 CDCA7LQ96GN5 454 aa32.48■■■□□ 2.79
NKX2-1-205ENST00000546983 MASTLQ96GX5 879 aa32.48■■■□□ 2.79
NKX2-1-205ENST00000546983 TRMT112Q9UI30 125 aaKnown RBP32.48■■■□□ 2.79
NKX2-1-205ENST00000546983 ZBED9Q6R2W3 1325 aa32.48■■■□□ 2.79
NKX2-1-205ENST00000546983 CHRNA5P30532 468 aa32.47■■■□□ 2.79
NKX2-1-205ENST00000546983 FKBP5Q13451 457 aaPredicted RBP32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms