RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 THUMPD2Q9BTF0 503 aaKnown RBP18.98■□□□□ 0.63
COL2A1-209ENST00000546974 NMRK2Q9NPI5 230 aa18.98■□□□□ 0.63
COL2A1-209ENST00000546974 ZC3H4Q9UPT8 1303 aaKnown RBP18.98■□□□□ 0.63
COL2A1-209ENST00000546974 LMNB1P20700 586 aa18.97■□□□□ 0.63
COL2A1-209ENST00000546974 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
COL2A1-209ENST00000546974 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
COL2A1-209ENST00000546974 NBPF5PQ86XG9 351 aaPredicted RBP18.96■□□□□ 0.63
COL2A1-209ENST00000546974 FER1L6Q2WGJ9 1857 aa18.95■□□□□ 0.62
COL2A1-209ENST00000546974 RIPK4P57078 832 aa18.95■□□□□ 0.62
COL2A1-209ENST00000546974 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
COL2A1-209ENST00000546974 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
COL2A1-209ENST00000546974 NIP7Q9Y221 180 aaKnown RBP eCLIP18.95■□□□□ 0.62
COL2A1-209ENST00000546974 NFKBIEO00221 500 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 SRGNP10124 158 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 PRELPP51888 382 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 TPTE2Q6XPS3 522 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 MASTLQ96GX5 879 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 SLX4Q8IY92 1834 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 CACNA1SQ13698 1873 aa18.94■□□□□ 0.62
COL2A1-209ENST00000546974 ARFGEF2Q9Y6D5 1785 aa18.93■□□□□ 0.62
COL2A1-209ENST00000546974 NUP98P52948 1817 aa18.93■□□□□ 0.62
COL2A1-209ENST00000546974 C21orf2O43822 256 aa18.93■□□□□ 0.62
COL2A1-209ENST00000546974 TMPOP42166 694 aaKnown RBP18.93■□□□□ 0.62
COL2A1-209ENST00000546974 HLFQ16534 295 aa18.93■□□□□ 0.62
COL2A1-209ENST00000546974 BABAM1Q9NWV8 329 aa18.93■□□□□ 0.62
COL2A1-209ENST00000546974 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
COL2A1-209ENST00000546974 TNRC6CQ9HCJ0 1690 aaKnown RBP18.92■□□□□ 0.62
COL2A1-209ENST00000546974 DICER1Q9UPY3 1922 aaKnown RBP18.92■□□□□ 0.62
COL2A1-209ENST00000546974 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
COL2A1-209ENST00000546974 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
COL2A1-209ENST00000546974 C16orf71Q8IYS4 520 aaPredicted RBP18.92■□□□□ 0.62
COL2A1-209ENST00000546974 KLRG2A4D1S0 409 aaPredicted RBP18.91■□□□□ 0.62
COL2A1-209ENST00000546974 NGEFQ8N5V2 710 aa18.91■□□□□ 0.62
COL2A1-209ENST00000546974 RBM46Q8TBY0 533 aaKnown RBP18.91■□□□□ 0.62
COL2A1-209ENST00000546974 RRAGCQ9HB90 399 aa18.91■□□□□ 0.62
COL2A1-209ENST00000546974 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
COL2A1-209ENST00000546974 RRP7AQ9Y3A4 280 aaKnown RBP18.91■□□□□ 0.62
COL2A1-209ENST00000546974 ERBB4Q15303 1308 aa18.91■□□□□ 0.62
COL2A1-209ENST00000546974 MAP3K15Q6ZN16 1313 aa18.91■□□□□ 0.62
COL2A1-209ENST00000546974 GLTPD2A6NH11 291 aa18.9■□□□□ 0.62
COL2A1-209ENST00000546974 NPR1P16066 1061 aa18.9■□□□□ 0.62
COL2A1-209ENST00000546974 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
COL2A1-209ENST00000546974 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
COL2A1-209ENST00000546974 TIAM2Q8IVF5 1701 aa18.9■□□□□ 0.62
COL2A1-209ENST00000546974 LTBP3Q9NS15 1303 aa18.9■□□□□ 0.62
COL2A1-209ENST00000546974 MYL6BP14649 208 aa18.89■□□□□ 0.61
COL2A1-209ENST00000546974 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.61
COL2A1-209ENST00000546974 TTLL7Q6ZT98 887 aa18.89■□□□□ 0.61
COL2A1-209ENST00000546974 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
COL2A1-209ENST00000546974 APLP1P51693 650 aa18.88■□□□□ 0.61
COL2A1-209ENST00000546974 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
COL2A1-209ENST00000546974 GTF2E1P29083 439 aaPredicted RBP18.87■□□□□ 0.61
COL2A1-209ENST00000546974 FSTL1Q12841 308 aa18.87■□□□□ 0.61
COL2A1-209ENST00000546974 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
COL2A1-209ENST00000546974 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
COL2A1-209ENST00000546974 RUNDC1Q96C34 613 aa18.87■□□□□ 0.61
COL2A1-209ENST00000546974 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
COL2A1-209ENST00000546974 C7orf43Q8WVR3 580 aa18.86■□□□□ 0.61
COL2A1-209ENST00000546974 VEGFAP15692 232 aaPredicted RBP18.85■□□□□ 0.61
COL2A1-209ENST00000546974 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
COL2A1-209ENST00000546974 ERFEQ4G0M1 354 aa18.85■□□□□ 0.61
COL2A1-209ENST00000546974 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
COL2A1-209ENST00000546974 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
COL2A1-209ENST00000546974 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
COL2A1-209ENST00000546974 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
COL2A1-209ENST00000546974 IBTKQ9P2D0 1353 aaPredicted RBP18.84■□□□□ 0.61
COL2A1-209ENST00000546974 EIF2S2P20042 333 aaKnown RBP18.84■□□□□ 0.61
COL2A1-209ENST00000546974 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
COL2A1-209ENST00000546974 PDIA6Q15084 440 aa18.84■□□□□ 0.61
COL2A1-209ENST00000546974 CCDC93Q567U6 631 aa18.84■□□□□ 0.61
COL2A1-209ENST00000546974 GIGYF2Q6Y7W6 1299 aaKnown RBP18.84■□□□□ 0.61
COL2A1-209ENST00000546974 LRP10Q7Z4F1 713 aa18.84■□□□□ 0.61
COL2A1-209ENST00000546974 CHL1O00533 1208 aa18.83■□□□□ 0.6
COL2A1-209ENST00000546974 ZNF34Q8IZ26 560 aa18.83■□□□□ 0.6
COL2A1-209ENST00000546974 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.6
COL2A1-209ENST00000546974 WDR90Q96KV7 1748 aa18.83■□□□□ 0.6
COL2A1-209ENST00000546974 UBN2Q6ZU65 1347 aa18.82■□□□□ 0.6
COL2A1-209ENST00000546974 GPTP24298 496 aa18.82■□□□□ 0.6
COL2A1-209ENST00000546974 CRY2Q49AN0 593 aa18.82■□□□□ 0.6
COL2A1-209ENST00000546974 NUTM1Q86Y26 1132 aa18.82■□□□□ 0.6
COL2A1-209ENST00000546974 RIC1Q4ADV7 1423 aa18.82■□□□□ 0.6
COL2A1-209ENST00000546974 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
COL2A1-209ENST00000546974 SUSD4Q5VX71 490 aa18.81■□□□□ 0.6
COL2A1-209ENST00000546974 SMC1BQ8NDV3 1235 aa18.81■□□□□ 0.6
COL2A1-209ENST00000546974 POTECB2RU33 542 aa18.8■□□□□ 0.6
COL2A1-209ENST00000546974 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL2A1-209ENST00000546974 PARP10Q53GL7 1025 aa18.8■□□□□ 0.6
COL2A1-209ENST00000546974 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
COL2A1-209ENST00000546974 RTKN2Q8IZC4 609 aa18.8■□□□□ 0.6
COL2A1-209ENST00000546974 NTSR2O95665 410 aa18.79■□□□□ 0.6
COL2A1-209ENST00000546974 ANXA1P04083 346 aa18.79■□□□□ 0.6
COL2A1-209ENST00000546974 PROSER3Q2NL68 480 aa18.79■□□□□ 0.6
COL2A1-209ENST00000546974 DNAJC5GQ8N7S2 189 aa18.79■□□□□ 0.6
COL2A1-209ENST00000546974 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
COL2A1-209ENST00000546974 LAS1LQ9Y4W2 734 aaKnown RBP18.78■□□□□ 0.6
COL2A1-209ENST00000546974 OLFM4Q6UX06 510 aa18.77■□□□□ 0.6
COL2A1-209ENST00000546974 COPS6Q7L5N1 327 aa18.77■□□□□ 0.6
COL2A1-209ENST00000546974 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
COL2A1-209ENST00000546974 DDX21Q9NR30 783 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL2A1-209ENST00000546974 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms