RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
PTCH1-213ENST00000546820 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
PTCH1-213ENST00000546820 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
PTCH1-213ENST00000546820 MAP3K15Q6ZN16 1313 aa17.64■□□□□ 0.41
PTCH1-213ENST00000546820 FKBP8Q14318 412 aa17.63■□□□□ 0.41
PTCH1-213ENST00000546820 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
PTCH1-213ENST00000546820 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
PTCH1-213ENST00000546820 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
PTCH1-213ENST00000546820 MMP10P09238 476 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 HSP90AB3PQ58FF7 597 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
PTCH1-213ENST00000546820 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 PLBD2Q8NHP8 589 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
PTCH1-213ENST00000546820 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
PTCH1-213ENST00000546820 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
PTCH1-213ENST00000546820 TM4SF1P30408 202 aa17.6■□□□□ 0.41
PTCH1-213ENST00000546820 PTGER2P43116 358 aa17.6■□□□□ 0.41
PTCH1-213ENST00000546820 BICDL1Q6ZP65 573 aa17.6■□□□□ 0.41
PTCH1-213ENST00000546820 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
PTCH1-213ENST00000546820 NFIXQ14938 502 aa17.59■□□□□ 0.41
PTCH1-213ENST00000546820 HLFQ16534 295 aa17.59■□□□□ 0.41
PTCH1-213ENST00000546820 CACNA1FO60840 1977 aa17.59■□□□□ 0.41
PTCH1-213ENST00000546820 FLIIQ13045 1269 aa17.58■□□□□ 0.4
PTCH1-213ENST00000546820 TBC1D9BQ66K14 1250 aa17.58■□□□□ 0.4
PTCH1-213ENST00000546820 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.4
PTCH1-213ENST00000546820 SGIP1Q9BQI5 828 aa17.58■□□□□ 0.4
PTCH1-213ENST00000546820 NIP7Q9Y221 180 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTCH1-213ENST00000546820 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-213ENST00000546820 KSR2Q6VAB6 950 aa17.57■□□□□ 0.4
PTCH1-213ENST00000546820 MRPL50Q8N5N7 158 aaKnown RBP17.57■□□□□ 0.4
PTCH1-213ENST00000546820 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
PTCH1-213ENST00000546820 NPHP1O15259 732 aa17.56■□□□□ 0.4
PTCH1-213ENST00000546820 SERPINB2P05120 415 aa17.56■□□□□ 0.4
PTCH1-213ENST00000546820 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
PTCH1-213ENST00000546820 G2E3Q7L622 706 aa17.56■□□□□ 0.4
PTCH1-213ENST00000546820 PI4KAP2A4QPH2 592 aa17.55■□□□□ 0.4
PTCH1-213ENST00000546820 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
PTCH1-213ENST00000546820 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
PTCH1-213ENST00000546820 NEXNQ0ZGT2 675 aa17.55■□□□□ 0.4
PTCH1-213ENST00000546820 PARP10Q53GL7 1025 aa17.55■□□□□ 0.4
PTCH1-213ENST00000546820 TPTE2Q6XPS3 522 aa17.55■□□□□ 0.4
PTCH1-213ENST00000546820 PI4KAP1Q8N8J0 262 aa17.55■□□□□ 0.4
PTCH1-213ENST00000546820 CARMIL3Q8ND23 1372 aa17.54■□□□□ 0.4
PTCH1-213ENST00000546820 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-213ENST00000546820 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
PTCH1-213ENST00000546820 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
PTCH1-213ENST00000546820 METTL22Q9BUU2 404 aaPredicted RBP17.54■□□□□ 0.4
PTCH1-213ENST00000546820 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
PTCH1-213ENST00000546820 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
PTCH1-213ENST00000546820 GPTP24298 496 aa17.53■□□□□ 0.4
PTCH1-213ENST00000546820 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-213ENST00000546820 DDR1Q08345 913 aa17.53■□□□□ 0.4
PTCH1-213ENST00000546820 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
PTCH1-213ENST00000546820 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
PTCH1-213ENST00000546820 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 PTPRCP08575 1304 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 SCN7AQ01118 1682 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 NUP98P52948 1817 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 IPO8O15397 1037 aaKnown RBP17.52■□□□□ 0.4
PTCH1-213ENST00000546820 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
PTCH1-213ENST00000546820 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 BCORQ6W2J9 1755 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 ATP10DQ9P241 1426 aa17.52■□□□□ 0.4
PTCH1-213ENST00000546820 ST5P78524 1137 aa17.51■□□□□ 0.39
PTCH1-213ENST00000546820 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
PTCH1-213ENST00000546820 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
PTCH1-213ENST00000546820 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
PTCH1-213ENST00000546820 MYD88Q99836 296 aa17.51■□□□□ 0.39
PTCH1-213ENST00000546820 KIF16BQ96L93 1317 aa17.5■□□□□ 0.39
PTCH1-213ENST00000546820 FAM177BA6PVY3 158 aa17.5■□□□□ 0.39
PTCH1-213ENST00000546820 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
PTCH1-213ENST00000546820 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
PTCH1-213ENST00000546820 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
PTCH1-213ENST00000546820 LRP5O75197 1615 aa17.5■□□□□ 0.39
PTCH1-213ENST00000546820 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
PTCH1-213ENST00000546820 SUSD4Q5VX71 490 aa17.49■□□□□ 0.39
PTCH1-213ENST00000546820 NLRP10Q86W26 655 aa17.49■□□□□ 0.39
PTCH1-213ENST00000546820 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
PTCH1-213ENST00000546820 ARHGAP45Q92619 1136 aa17.49■□□□□ 0.39
PTCH1-213ENST00000546820 API5Q9BZZ5 524 aaKnown RBP17.49■□□□□ 0.39
PTCH1-213ENST00000546820 ADCY9O60503 1353 aa17.49■□□□□ 0.39
PTCH1-213ENST00000546820 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
PTCH1-213ENST00000546820 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
PTCH1-213ENST00000546820 FHDC1Q9C0D6 1143 aaPredicted RBP17.48■□□□□ 0.39
PTCH1-213ENST00000546820 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
PTCH1-213ENST00000546820 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 UBN2Q6ZU65 1347 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 F6X3S4 739 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 BCAR3O75815 825 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 HSP90B1P14625 803 aaKnown RBP17.47■□□□□ 0.39
PTCH1-213ENST00000546820 PDE6BP35913 854 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 TGFB2P61812 414 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
PTCH1-213ENST00000546820 FRAT1Q92837 279 aaPredicted RBP17.47■□□□□ 0.39
PTCH1-213ENST00000546820 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms