RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 EIF5P55010 431 aaKnown RBP14.83□□□□□ -0.04
PTCH1-212ENST00000546744 SYCP1Q15431 976 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-212ENST00000546744 HMG20BQ9P0W2 317 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
PTCH1-212ENST00000546744 MAP2K1Q02750 393 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-212ENST00000546744 SKIDA1Q1XH10 827 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 TTC22Q5TAA0 569 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 CDK5RAP3Q96JB5 506 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 NPATQ14207 1427 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 ARFGAP2Q8N6H7 521 aa14.83□□□□□ -0.04
PTCH1-212ENST00000546744 NPHP3Q7Z494 1330 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 CAMK4Q16566 473 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC186Q7Z3E2 898 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 GOLGA1Q92805 767 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 PPP1R9BQ96SB3 815 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 INO80Q9ULG1 1556 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-212ENST00000546744 FGFR1OPO95684 399 aaKnown RBP14.82□□□□□ -0.04
PTCH1-212ENST00000546744 IGHDP01880 384 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 HDGFL1Q5TGJ6 251 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 TRMT1Q9NXH9 659 aaKnown RBP14.82□□□□□ -0.04
PTCH1-212ENST00000546744 EIF2AK4Q9P2K8 1649 aaKnown RBP14.82□□□□□ -0.04
PTCH1-212ENST00000546744 NEFHP12036 1026 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 TRIM27P14373 513 aa14.82□□□□□ -0.04
PTCH1-212ENST00000546744 ENOX2Q16206 610 aaKnown RBP14.82□□□□□ -0.04
PTCH1-212ENST00000546744 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-212ENST00000546744 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 TMX3Q96JJ7 454 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 SCAF11Q99590 1463 aaKnown RBP14.81□□□□□ -0.04
PTCH1-212ENST00000546744 KDM4AO75164 1064 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 CAPN2P17655 700 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 GNG11P61952 73 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC158Q5M9N0 1113 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 RNF187Q5TA31 235 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-212ENST00000546744 TMC6Q7Z403 805 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
PTCH1-212ENST00000546744 SSR1P43307 286 aaKnown RBP14.81□□□□□ -0.04
PTCH1-212ENST00000546744 ALS2CR12Q96Q35 445 aa14.81□□□□□ -0.04
PTCH1-212ENST00000546744 CTAGE15A4D2H0 777 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 CTAGE8P0CG41 777 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 CTAGE6Q86UF2 777 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 CTAGE4Q8IX94 777 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 A0A1B0GUA9 196 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 TRERF1Q96PN7 1200 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTCH1-212ENST00000546744 PARD3Q8TEW0 1356 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 GBP2P32456 591 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-212ENST00000546744 STK3Q13188 491 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 CWC27Q6UX04 472 aaKnown RBP14.8□□□□□ -0.04
PTCH1-212ENST00000546744 TRPM2O94759 1503 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 SRGAP3O43295 1099 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 SPAG1Q07617 926 aa14.8□□□□□ -0.04
PTCH1-212ENST00000546744 IPO4Q8TEX9 1081 aaKnown RBP14.8□□□□□ -0.04
PTCH1-212ENST00000546744 TET3O43151 1660 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 GOLIM4O00461 696 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-212ENST00000546744 FKBP15Q5T1M5 1219 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 PPM1EQ8WY54 764 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 C14orf93Q9H972 538 aaKnown RBP14.79□□□□□ -0.04
PTCH1-212ENST00000546744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.79□□□□□ -0.04
PTCH1-212ENST00000546744 MAGI2Q86UL8 1455 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 BMP2KQ9NSY1 1161 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-212ENST00000546744 FERMT3Q86UX7 667 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 FSIP1Q8NA03 581 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
PTCH1-212ENST00000546744 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
PTCH1-212ENST00000546744 PTPRTO14522 1441 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 GTF2E1P29083 439 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-212ENST00000546744 ATL3Q6DD88 541 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 VPS36Q86VN1 386 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC12Q8WUD4 166 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-212ENST00000546744 TRIM34Q9BYJ4 488 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 CEBPAP49715 358 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-212ENST00000546744 TAX1BP1Q86VP1 789 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 CKAP2LQ8IYA6 745 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 NSD3Q9BZ95 1437 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 STK11IPQ8N1F8 1099 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 TTC12Q9H892 705 aaPredicted RBP14.78□□□□□ -0.04
PTCH1-212ENST00000546744 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 HSF2BPO75031 334 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 NECTIN2Q92692 538 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 TAOK3Q9H2K8 898 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
PTCH1-212ENST00000546744 MKRN1Q9UHC7 482 aaKnown RBP14.78□□□□□ -0.04
PTCH1-212ENST00000546744 SPATA31E1Q6ZUB1 1445 aa14.77□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC69A6NI79 296 aa14.77□□□□□ -0.04
PTCH1-212ENST00000546744 TDO2P48775 406 aa14.77□□□□□ -0.04
PTCH1-212ENST00000546744 TXNDC2Q86VQ3 553 aa14.77□□□□□ -0.04
PTCH1-212ENST00000546744 C8orf76Q96K31 380 aa14.77□□□□□ -0.04
PTCH1-212ENST00000546744 CCDC43Q96MW1 224 aaKnown RBP14.77□□□□□ -0.04
PTCH1-212ENST00000546744 DISP3Q9P2K9 1392 aa14.77□□□□□ -0.05
PTCH1-212ENST00000546744 NSRP1Q9H0G5 558 aaKnown RBP14.77□□□□□ -0.05
PTCH1-212ENST00000546744 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
PTCH1-212ENST00000546744 RSPH14Q9UHP6 348 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms