RNA–Protein interactions for RNA: ENST00000546455.5

PCED1B-202, Transcript of PC-esterase domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1B, Length 2,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-202ENST00000546455 MTX1Q13505 466 aa18.8■□□□□ 0.6
PCED1B-202ENST00000546455 CHMP4AQ9BY43 222 aa18.8■□□□□ 0.6
PCED1B-202ENST00000546455 GADD45BO75293 160 aaPredicted RBP18.79■□□□□ 0.6
PCED1B-202ENST00000546455 IFIT2P09913 472 aaKnown RBP18.79■□□□□ 0.6
PCED1B-202ENST00000546455 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
PCED1B-202ENST00000546455 TTC14Q96N46 770 aa18.79■□□□□ 0.6
PCED1B-202ENST00000546455 ALDH1L1O75891 902 aa18.79■□□□□ 0.6
PCED1B-202ENST00000546455 RUFY3Q7L099 469 aa18.79■□□□□ 0.6
PCED1B-202ENST00000546455 AACSQ86V21 672 aa18.79■□□□□ 0.6
PCED1B-202ENST00000546455 KAZALD1Q96I82 304 aa18.79■□□□□ 0.6
PCED1B-202ENST00000546455 TTC41PQ6P2S7 1318 aa18.79■□□□□ 0.6
PCED1B-202ENST00000546455 LRSAM1Q6UWE0 723 aa18.78■□□□□ 0.6
PCED1B-202ENST00000546455 KRT28Q7Z3Y7 464 aa18.78■□□□□ 0.6
PCED1B-202ENST00000546455 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
PCED1B-202ENST00000546455 ECHDC1Q9NTX5 307 aa18.78■□□□□ 0.6
PCED1B-202ENST00000546455 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
PCED1B-202ENST00000546455 MYL6BP14649 208 aa18.78■□□□□ 0.6
PCED1B-202ENST00000546455 CASTP20810 708 aaKnown RBP18.78■□□□□ 0.6
PCED1B-202ENST00000546455 RNF214Q8ND24 703 aa18.78■□□□□ 0.6
PCED1B-202ENST00000546455 SIL1Q9H173 461 aa18.78■□□□□ 0.6
PCED1B-202ENST00000546455 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.6
PCED1B-202ENST00000546455 HEG1Q9ULI3 1381 aa18.77■□□□□ 0.6
PCED1B-202ENST00000546455 LARGE1O95461 756 aa18.77■□□□□ 0.6
PCED1B-202ENST00000546455 ADCK5Q3MIX3 580 aa18.77■□□□□ 0.6
PCED1B-202ENST00000546455 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
PCED1B-202ENST00000546455 CCDC8Q9H0W5 538 aaPredicted RBP18.77■□□□□ 0.6
PCED1B-202ENST00000546455 GRM8O00222 908 aa18.77■□□□□ 0.59
PCED1B-202ENST00000546455 EPB41L2O43491 1005 aaKnown RBP18.77■□□□□ 0.59
PCED1B-202ENST00000546455 PDIA6Q15084 440 aa18.77■□□□□ 0.59
PCED1B-202ENST00000546455 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.59
PCED1B-202ENST00000546455 NCAPD2Q15021 1401 aa18.76■□□□□ 0.59
PCED1B-202ENST00000546455 MBD3O95983 291 aa18.76■□□□□ 0.59
PCED1B-202ENST00000546455 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
PCED1B-202ENST00000546455 HYPKQ9NX55 129 aa18.76■□□□□ 0.59
PCED1B-202ENST00000546455 TLR7Q9NYK1 1049 aaKnown RBP18.76■□□□□ 0.59
PCED1B-202ENST00000546455 SASH1O94885 1247 aa18.75■□□□□ 0.59
PCED1B-202ENST00000546455 PIP4K2AP48426 406 aaPredicted RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 LINS1Q8NG48 757 aa18.75■□□□□ 0.59
PCED1B-202ENST00000546455 DDX17Q92841 729 aaKnown RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 WDR33Q9C0J8 1336 aaKnown RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 SLIT3O75094 1523 aa18.75■□□□□ 0.59
PCED1B-202ENST00000546455 PHRF1Q9P1Y6 1649 aaKnown RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 JARID2Q92833 1246 aaPredicted RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
PCED1B-202ENST00000546455 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
PCED1B-202ENST00000546455 FAM227BQ96M60 508 aa18.74■□□□□ 0.59
PCED1B-202ENST00000546455 JAKMIP1Q96N16 626 aaKnown RBP18.74■□□□□ 0.59
PCED1B-202ENST00000546455 DDX21Q9NR30 783 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCED1B-202ENST00000546455 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
PCED1B-202ENST00000546455 LIMCH1Q9UPQ0 1083 aa18.74■□□□□ 0.59
PCED1B-202ENST00000546455 RIC3Q7Z5B4 369 aa18.74■□□□□ 0.59
PCED1B-202ENST00000546455 ERBB3P21860 1342 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 ZSCAN30Q86W11 494 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 PROSER2Q86WR7 435 aaPredicted RBP18.73■□□□□ 0.59
PCED1B-202ENST00000546455 GPATCH3Q96I76 525 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 CNPY2Q9Y2B0 182 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
PCED1B-202ENST00000546455 ZNF790Q6PG37 636 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 ERC1Q8IUD2 1116 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 CCDC83Q8IWF9 413 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 RUFY2Q8WXA3 655 aa18.73■□□□□ 0.59
PCED1B-202ENST00000546455 DDX58O95786 925 aaKnown RBP18.72■□□□□ 0.59
PCED1B-202ENST00000546455 G3BP1Q13283 466 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCED1B-202ENST00000546455 SYT1P21579 422 aa18.72■□□□□ 0.59
PCED1B-202ENST00000546455 XAGE3Q8WTP9 111 aa18.72■□□□□ 0.59
PCED1B-202ENST00000546455 BOLA2Q9H3K6 86 aa18.72■□□□□ 0.59
PCED1B-202ENST00000546455 NMIQ13287 307 aaPredicted RBP18.71■□□□□ 0.59
PCED1B-202ENST00000546455 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 RAPGEF4Q8WZA2 1011 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 PDRG1Q9NUG6 133 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 SMC3Q9UQE7 1217 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 OVOS2A0A0G2JMS6 1433 aa18.71■□□□□ 0.59
PCED1B-202ENST00000546455 ZSCAN22P10073 491 aaPredicted RBP18.71■□□□□ 0.58
PCED1B-202ENST00000546455 MYD88Q99836 296 aa18.71■□□□□ 0.58
PCED1B-202ENST00000546455 STX6O43752 255 aa18.7■□□□□ 0.58
PCED1B-202ENST00000546455 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
PCED1B-202ENST00000546455 PDLIM2Q96JY6 352 aa18.7■□□□□ 0.58
PCED1B-202ENST00000546455 KCNJ4P48050 445 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 RBM8AQ9Y5S9 174 aaKnown RBP18.69■□□□□ 0.58
PCED1B-202ENST00000546455 UTYO14607 1347 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 CCDC171Q6TFL3 1326 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 KDM6AO15550 1401 aaPredicted RBP18.69■□□□□ 0.58
PCED1B-202ENST00000546455 MSNP26038 577 aaKnown RBP18.69■□□□□ 0.58
PCED1B-202ENST00000546455 NECAB1Q8N987 351 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 CABLES1Q8TDN4 633 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 ZNF496Q96IT1 587 aaPredicted RBP18.69■□□□□ 0.58
PCED1B-202ENST00000546455 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.69■□□□□ 0.58
PCED1B-202ENST00000546455 ZNF142P52746 1687 aaPredicted RBP18.69■□□□□ 0.58
PCED1B-202ENST00000546455 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
PCED1B-202ENST00000546455 NEURL1BA8MQ27 555 aa18.68■□□□□ 0.58
PCED1B-202ENST00000546455 GJB2P29033 226 aa18.68■□□□□ 0.58
PCED1B-202ENST00000546455 EDC3Q96F86 508 aaKnown RBP18.68■□□□□ 0.58
PCED1B-202ENST00000546455 TSPY26PQ9H489 355 aa18.68■□□□□ 0.58
PCED1B-202ENST00000546455 HDAC5Q9UQL6 1122 aa18.68■□□□□ 0.58
PCED1B-202ENST00000546455 A0A0D9SFI3 127 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms