RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 PDZRN3Q9UPQ7 1066 aa20.26■□□□□ 0.83
SCRIB-208ENST00000546337 FANCIQ9NVI1 1328 aa20.26■□□□□ 0.83
SCRIB-208ENST00000546337 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
SCRIB-208ENST00000546337 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
SCRIB-208ENST00000546337 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
SCRIB-208ENST00000546337 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
SCRIB-208ENST00000546337 ELL2O00472 640 aaPredicted RBP20.24■□□□□ 0.83
SCRIB-208ENST00000546337 TTLL7Q6ZT98 887 aa20.24■□□□□ 0.83
SCRIB-208ENST00000546337 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
SCRIB-208ENST00000546337 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
SCRIB-208ENST00000546337 C10orf71Q711Q0 1435 aa20.23■□□□□ 0.83
SCRIB-208ENST00000546337 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 VAMP4O75379 141 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 PROSER3Q2NL68 480 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 PARP10Q53GL7 1025 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 TPTE2Q6XPS3 522 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 TSPYL6Q8N831 410 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 NECTIN2Q92692 538 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 STK31Q9BXU1 1019 aa20.22■□□□□ 0.83
SCRIB-208ENST00000546337 ATP10DQ9P241 1426 aa20.21■□□□□ 0.83
SCRIB-208ENST00000546337 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
SCRIB-208ENST00000546337 HLFQ16534 295 aa20.21■□□□□ 0.83
SCRIB-208ENST00000546337 ANKRD13DQ6ZTN6 518 aa20.21■□□□□ 0.83
SCRIB-208ENST00000546337 PLBD2Q8NHP8 589 aa20.21■□□□□ 0.83
SCRIB-208ENST00000546337 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
SCRIB-208ENST00000546337 NIP7Q9Y221 180 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCRIB-208ENST00000546337 SCN7AQ01118 1682 aa20.2■□□□□ 0.82
SCRIB-208ENST00000546337 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
SCRIB-208ENST00000546337 BICDL1Q6ZP65 573 aa20.2■□□□□ 0.82
SCRIB-208ENST00000546337 ZNF34Q8IZ26 560 aa20.2■□□□□ 0.82
SCRIB-208ENST00000546337 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
SCRIB-208ENST00000546337 BRIP1Q9BX63 1249 aa20.2■□□□□ 0.82
SCRIB-208ENST00000546337 NYXQ9GZU5 481 aa20.2■□□□□ 0.82
SCRIB-208ENST00000546337 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
SCRIB-208ENST00000546337 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
SCRIB-208ENST00000546337 ZBTB3Q9H5J0 574 aa20.19■□□□□ 0.82
SCRIB-208ENST00000546337 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
SCRIB-208ENST00000546337 ANXA1P04083 346 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 PDE6BP35913 854 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 AIMP1Q12904 312 aaKnown RBP20.18■□□□□ 0.82
SCRIB-208ENST00000546337 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
SCRIB-208ENST00000546337 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
SCRIB-208ENST00000546337 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
SCRIB-208ENST00000546337 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
SCRIB-208ENST00000546337 GRIN3BO60391 1043 aa20.17■□□□□ 0.82
SCRIB-208ENST00000546337 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
SCRIB-208ENST00000546337 ST5P78524 1137 aa20.17■□□□□ 0.82
SCRIB-208ENST00000546337 PPP1R42Q7Z4L9 355 aa20.17■□□□□ 0.82
SCRIB-208ENST00000546337 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
SCRIB-208ENST00000546337 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
SCRIB-208ENST00000546337 NPHP1O15259 732 aa20.15■□□□□ 0.82
SCRIB-208ENST00000546337 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
SCRIB-208ENST00000546337 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
SCRIB-208ENST00000546337 H0YIN7 160 aa20.14■□□□□ 0.81
SCRIB-208ENST00000546337 GPR162Q16538 588 aa20.14■□□□□ 0.81
SCRIB-208ENST00000546337 PIM2Q9P1W9 311 aa20.14■□□□□ 0.81
SCRIB-208ENST00000546337 A0A0G2JLW4 131 aa20.13■□□□□ 0.81
SCRIB-208ENST00000546337 DPEP1P16444 411 aa20.13■□□□□ 0.81
SCRIB-208ENST00000546337 GTF2E1P29083 439 aaPredicted RBP20.13■□□□□ 0.81
SCRIB-208ENST00000546337 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
SCRIB-208ENST00000546337 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
SCRIB-208ENST00000546337 PHAXQ9H814 394 aaKnown RBP20.13■□□□□ 0.81
SCRIB-208ENST00000546337 PXDNLA1KZ92 1463 aa20.12■□□□□ 0.81
SCRIB-208ENST00000546337 KCNA3P22001 575 aa20.12■□□□□ 0.81
SCRIB-208ENST00000546337 ISCA1Q9BUE6 129 aa20.12■□□□□ 0.81
SCRIB-208ENST00000546337 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCRIB-208ENST00000546337 SLC10A5Q5PT55 438 aa20.11■□□□□ 0.81
SCRIB-208ENST00000546337 SUSD4Q5VX71 490 aa20.11■□□□□ 0.81
SCRIB-208ENST00000546337 NLRP10Q86W26 655 aa20.11■□□□□ 0.81
SCRIB-208ENST00000546337 UTP14AQ9BVJ6 771 aaKnown RBP20.11■□□□□ 0.81
SCRIB-208ENST00000546337 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
SCRIB-208ENST00000546337 UBN2Q6ZU65 1347 aa20.1■□□□□ 0.81
SCRIB-208ENST00000546337 HSP90B1P14625 803 aaKnown RBP20.1■□□□□ 0.81
SCRIB-208ENST00000546337 GPTP24298 496 aa20.1■□□□□ 0.81
SCRIB-208ENST00000546337 METTL22Q9BUU2 404 aaPredicted RBP20.1■□□□□ 0.81
SCRIB-208ENST00000546337 NUP98P52948 1817 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 NTSR2O95665 410 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 FLIIQ13045 1269 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 ALDH1L2Q3SY69 923 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 STYK1Q6J9G0 422 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 C2CD5Q86YS7 1000 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 CDCA7LQ96GN5 454 aa20.09■□□□□ 0.81
SCRIB-208ENST00000546337 AFDNP55196 1824 aaKnown RBP20.09■□□□□ 0.81
SCRIB-208ENST00000546337 DALRD3Q5D0E6 543 aaKnown RBP20.08■□□□□ 0.81
SCRIB-208ENST00000546337 CCDC191Q8NCU4 936 aa20.08■□□□□ 0.81
SCRIB-208ENST00000546337 CACNA1FO60840 1977 aa20.08■□□□□ 0.8
SCRIB-208ENST00000546337 PI4KAP2A4QPH2 592 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 SRGNP10124 158 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 NEXNQ0ZGT2 675 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 TTLL6Q8N841 843 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 PI4KAP1Q8N8J0 262 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 CNKSR1Q969H4 720 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
SCRIB-208ENST00000546337 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms