RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	PSMA5	P28066	241 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	SF3B2	Q13435	895 aa	Known RBP	11.96	□□□□□ -0.49
UBC-213	ENST00000546120	GPR161	Q8N6U8	529 aa	Known RBP	11.96	□□□□□ -0.49
UBC-213	ENST00000546120	SPC24	Q8NBT2	197 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	MYCBP	Q99417	103 aa	Predicted RBP	11.96	□□□□□ -0.49
UBC-213	ENST00000546120	BPIFA3	Q9BQP9	254 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	TRIM34	Q9BYJ4	488 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	MBIP	Q9NS73	344 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	HDAC5	Q9UQL6	1122 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	FHOD1	Q9Y613	1164 aa		11.96	□□□□□ -0.49
UBC-213	ENST00000546120	FYB1	O15117	783 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	PNMA6A	P0CW24	399 aa	Predicted RBP	11.95	□□□□□ -0.5
UBC-213	ENST00000546120	USP8	P40818	1118 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	STX1A	Q16623	288 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.95	□□□□□ -0.5
UBC-213	ENST00000546120	PPM1E	Q8WY54	764 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	DEF6	Q9H4E7	631 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	ANO10	Q9NW15	660 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	MTMR6	Q9Y217	621 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	NEXMIF	Q5QGS0	1516 aa		11.95	□□□□□ -0.5
UBC-213	ENST00000546120	TTC41P	Q6P2S7	1318 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	TTC21A	Q8NDW8	1320 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	RAPGEF3	O95398	923 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	ZKSCAN1	P17029	563 aa	Predicted RBP	11.94	□□□□□ -0.5
UBC-213	ENST00000546120	PRKAR2B	P31323	418 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	MAGEA9	P43362	315 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	GTF2A1	P52655	376 aa	Predicted RBP	11.94	□□□□□ -0.5
UBC-213	ENST00000546120	SNW1	Q13573	536 aa	Known RBP	11.94	□□□□□ -0.5
UBC-213	ENST00000546120	LEKR1	Q6ZMV7	388 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	CNTROB	Q8N137	903 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	CACTIN	Q8WUQ7	758 aa	Known RBP	11.94	□□□□□ -0.5
UBC-213	ENST00000546120	NCAPG	Q9BPX3	1015 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	ACBD3	Q9H3P7	528 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	C1orf115	Q9H7X2	142 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	TRAK1	Q9UPV9	953 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.94	□□□□□ -0.5	4e-13	■□□□□ 11.1
UBC-213	ENST00000546120	NEO1	Q92859	1461 aa		11.94	□□□□□ -0.5
UBC-213	ENST00000546120		A0A1W2PP64	1363 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	UGGT1	Q9NYU2	1555 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	BECN2	A8MW95	431 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	FIBP	O43427	364 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	KIF1C	O43896	1103 aa	Known RBP	11.93	□□□□□ -0.5
UBC-213	ENST00000546120	EIF3J	O75822	258 aa	Known RBP	11.93	□□□□□ -0.5
UBC-213	ENST00000546120	GUCY2C	P25092	1073 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	NOP2	P46087	812 aa	Known RBP	11.93	□□□□□ -0.5
UBC-213	ENST00000546120	ATP8B2	P98198	1209 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	ZSCAN26	Q16670	478 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.93	□□□□□ -0.5
UBC-213	ENST00000546120	ANO6	Q4KMQ2	910 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	SWT1	Q5T5J6	900 aa	Known RBP	11.93	□□□□□ -0.5
UBC-213	ENST00000546120	TICAM2	Q86XR7	235 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	MPHOSPH8	Q99549	860 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	DNAI1	Q9UI46	699 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	CYP46A1	Q9Y6A2	500 aa		11.93	□□□□□ -0.5
UBC-213	ENST00000546120	TULP4	Q9NRJ4	1543 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	SGSM2	O43147	1006 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	AP5Z1	O43299	807 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	ZSCAN12	O43309	604 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	SMARCA5	O60264	1052 aa	Predicted RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	ETF1	P62495	437 aa	Known RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	BRD3	Q15059	726 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	ZRSR1	Q15695	479 aa	Known RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	CCDC91	Q7Z6B0	441 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	SUGP1	Q8IWZ8	645 aa	Known RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	CEP120	Q8N960	986 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	JARID2	Q92833	1246 aa	Predicted RBP	11.92	□□□□□ -0.5
UBC-213	ENST00000546120	ZSWIM6	Q9HCJ5	1215 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	ARFGAP3	Q9NP61	516 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	BABAM1	Q9NWV8	329 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	RSPH14	Q9UHP6	348 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	RIMS2	Q9UQ26	1411 aa		11.92	□□□□□ -0.5
UBC-213	ENST00000546120	ATP7A	Q04656	1500 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	LRRC7	Q96NW7	1537 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	ATP7B	P35670	1465 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120		A6NNZ2	444 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	MYO1C	O00159	1063 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	CHL1	O00533	1208 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	DHX16	O60231	1041 aa	Known RBP	11.91	□□□□□ -0.5
UBC-213	ENST00000546120	IGSF3	O75054	1194 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	CALR	P27797	417 aa	Known RBP	11.91	□□□□□ -0.5
UBC-213	ENST00000546120	GJB2	P29033	226 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	ACTN2	P35609	894 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	PSME1	Q06323	249 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	ELF2	Q15723	593 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	TUBB8	Q3ZCM7	444 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	CEP57L1	Q8IYX8	460 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	SPATA32	Q96LK8	384 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	CEP89	Q96ST8	783 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	GBP3	Q9H0R5	595 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	GDPD2	Q9HCC8	539 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	HYPK	Q9NX55	129 aa		11.91	□□□□□ -0.5
UBC-213	ENST00000546120	CLTC	Q00610	1675 aa	Known RBP	11.91	□□□□□ -0.5
UBC-213	ENST00000546120	USP42	Q9H9J4	1324 aa	Known RBP	11.9	□□□□□ -0.5
UBC-213	ENST00000546120	CFAP65	Q6ZU64	1925 aa	Known RBP	11.9	□□□□□ -0.5
UBC-213	ENST00000546120	FAM177B	A6PVY3	158 aa		11.9	□□□□□ -0.5
UBC-213	ENST00000546120	VGLL3	A8MV65	326 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 517.5 ms