RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 CRISPLD1Q9H336 500 aa5.42□□□□□ -1.54
CUL3-215ENST00000546102 CCDC88BA6NC98 1476 aa5.42□□□□□ -1.54
CUL3-215ENST00000546102 PIK3CDO00329 1044 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 BNIP3LO60238 219 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 THBS1P07996 1170 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 EPXP11678 715 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 COL8A1P27658 744 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 ELOAQ14241 798 aaKnown RBP5.41□□□□□ -1.54
CUL3-215ENST00000546102 NBPF1Q3BBV0 1214 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 OXLD1Q5BKU9 147 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 RNF135Q8IUD6 432 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 BTBD6Q96KE9 485 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 NOVA2Q9UNW9 492 aaKnown RBP5.41□□□□□ -1.54
CUL3-215ENST00000546102 PCDHGC4Q9Y5F7 938 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 HRH3Q9Y5N1 445 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 GJA3Q9Y6H8 435 aa5.41□□□□□ -1.54
CUL3-215ENST00000546102 NEURL1BA8MQ27 555 aa5.4□□□□□ -1.54
CUL3-215ENST00000546102 ATXN7O15265 892 aaPredicted RBP5.4□□□□□ -1.54
CUL3-215ENST00000546102 ADH6P28332 368 aa5.4□□□□□ -1.54
CUL3-215ENST00000546102 CTBSQ01459 385 aa5.4□□□□□ -1.54
CUL3-215ENST00000546102 ARSJQ5FYB0 599 aaPredicted RBP5.4□□□□□ -1.54
CUL3-215ENST00000546102 PHLDB3Q6NSJ2 640 aa5.4□□□□□ -1.54
CUL3-215ENST00000546102 NLRP8Q86W28 1048 aa5.4□□□□□ -1.54
CUL3-215ENST00000546102 NIFKQ9BYG3 293 aaKnown RBP5.4□□□□□ -1.54
CUL3-215ENST00000546102 ETNK1Q9HBU6 452 aa5.4□□□□□ -1.54
CUL3-215ENST00000546102 USP17L3A6NCW0 530 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 USP17L4A6NCW7 530 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 C1QTNF9BB2RNN3 333 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 C2CD2LO14523 706 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 SKIP12755 728 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 TATP17735 454 aaPredicted RBP5.39□□□□□ -1.55
CUL3-215ENST00000546102 UBAP2LQ14157 1087 aaKnown RBP5.39□□□□□ -1.55
CUL3-215ENST00000546102 USP17L2Q6R6M4 530 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 LINC00114Q6XXX2 140 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 USP17L1Q7RTZ2 530 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 Q8N3U1 123 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 MRRFQ96E11 262 aaKnown RBP5.39□□□□□ -1.55
CUL3-215ENST00000546102 ZCCHC2Q9C0B9 1178 aaKnown RBP5.39□□□□□ -1.55
CUL3-215ENST00000546102 SUV39H2Q9H5I1 410 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 PRR12Q9ULL5 1215 aa5.39□□□□□ -1.55
CUL3-215ENST00000546102 SPDYE3A6NKU9 549 aa5.38□□□□□ -1.55
CUL3-215ENST00000546102 KHNYNO15037 678 aaKnown RBP5.38□□□□□ -1.55
CUL3-215ENST00000546102 ARID4AP29374 1257 aaPredicted RBP5.38□□□□□ -1.55
CUL3-215ENST00000546102 GDF10P55107 478 aa5.38□□□□□ -1.55
CUL3-215ENST00000546102 DNAJC14Q6Y2X3 702 aaPredicted RBP5.38□□□□□ -1.55
CUL3-215ENST00000546102 CHSY3Q70JA7 882 aa5.38□□□□□ -1.55
CUL3-215ENST00000546102 DEPDC4Q8N2C3 294 aa5.38□□□□□ -1.55
CUL3-215ENST00000546102 AVENQ9NQS1 362 aaPredicted RBP5.38□□□□□ -1.55
CUL3-215ENST00000546102 IGSF5Q9NSI5 407 aa5.38□□□□□ -1.55
CUL3-215ENST00000546102 NDFIP2Q9NV92 336 aa5.38□□□□□ -1.55
CUL3-215ENST00000546102 KIAA1522Q9P206 1035 aaPredicted RBP5.38□□□□□ -1.55
CUL3-215ENST00000546102 PRDM2Q13029 1718 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 DCDC2BA2VCK2 349 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L5A8MUK1 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L15C9J2P7 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L10C9JJH3 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L13C9JLJ4 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L12C9JPN9 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L11C9JVI0 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L21D6R901 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L18D6R9N7 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L22D6RA61 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L17D6RBQ6 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L19D6RCP7 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L20D6RJB6 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 INHAP05111 366 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 ALAS2P22557 587 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 SSFA2P28290 1259 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 DGKGP49619 791 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 USP17L24Q0WX57 530 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 BICDL1Q6ZP65 573 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 SLAIN2Q9P270 581 aa5.37□□□□□ -1.55
CUL3-215ENST00000546102 SOWAHDA6NJG2 315 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 MAPTP10636 758 aaKnown RBP5.36□□□□□ -1.55
CUL3-215ENST00000546102 ERCC3P19447 782 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 SERPINB4P48594 390 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 SMTNP53814 917 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 MAP7D1Q3KQU3 841 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 CRTC2Q53ET0 693 aaPredicted RBP5.36□□□□□ -1.55
CUL3-215ENST00000546102 FAM182BQ5T319 152 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 CD163Q86VB7 1156 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 NFATC2IPQ8NCF5 419 aa5.36□□□□□ -1.55
CUL3-215ENST00000546102 MKRN1Q9UHC7 482 aaKnown RBP5.36□□□□□ -1.55
CUL3-215ENST00000546102 A0A1W2PNR3 127 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 FAM196BA6NMK8 535 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 STAU1O95793 577 aaKnown RBP5.35□□□□□ -1.55
CUL3-215ENST00000546102 SPATA31C1P0DKV0 1188 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 ZNF16P17020 682 aaPredicted RBP5.35□□□□□ -1.55
CUL3-215ENST00000546102 CD33P20138 364 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 CHRNA4P43681 627 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 GATA4P43694 442 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 NOM1Q5C9Z4 860 aaKnown RBP5.35□□□□□ -1.55
CUL3-215ENST00000546102 PRRT3Q5FWE3 981 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 PLEKHM2Q8IWE5 1019 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 BCL2L13Q9BXK5 485 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 SEMA6BQ9H3T3 888 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 NEUROD4Q9HD90 331 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 ZDHHC3Q9NYG2 299 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 CABP1Q9NZU7 370 aa5.35□□□□□ -1.55
CUL3-215ENST00000546102 APBA3O96018 575 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms