RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 AK9Q5TCS8 1911 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 QRICH2Q9H0J4 1663 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 GOLIM4O00461 696 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
TRAF1-203ENST00000546084 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 CCDC144CPQ8IYA2 1237 aa11.66□□□□□ -0.54
TRAF1-203ENST00000546084 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.66□□□□□ -0.54
TRAF1-203ENST00000546084 CHGBP05060 677 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 WDR33Q9C0J8 1336 aaKnown RBP11.65□□□□□ -0.54
TRAF1-203ENST00000546084 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 CPLX1O14810 134 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 BICC1Q9H694 974 aaKnown RBP11.65□□□□□ -0.54
TRAF1-203ENST00000546084 ZDHHC9Q9Y397 364 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 GLRX3O76003 335 aaKnown RBP11.65□□□□□ -0.54
TRAF1-203ENST00000546084 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.54
TRAF1-203ENST00000546084 TIMM10P62072 90 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 SLC4A8Q2Y0W8 1093 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 RNF20Q5VTR2 975 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 ECHDC1Q9NTX5 307 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 KIAA1210Q9ULL0 1709 aa11.65□□□□□ -0.54
TRAF1-203ENST00000546084 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 A0A087WWV3 80 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 ZNF853P0CG23 659 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 CHAF1AQ13111 956 aaPredicted RBP11.64□□□□□ -0.55
TRAF1-203ENST00000546084 HS1BP3Q53T59 392 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 FILIP1Q7Z7B0 1213 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 STX6O43752 255 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 MCM2P49736 904 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 PTH1RQ03431 593 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 NMIQ13287 307 aaPredicted RBP11.64□□□□□ -0.55
TRAF1-203ENST00000546084 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
TRAF1-203ENST00000546084 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
TRAF1-203ENST00000546084 IL25Q9H293 177 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 IQSEC3Q9UPP2 1182 aaPredicted RBP11.64□□□□□ -0.55
TRAF1-203ENST00000546084 RBM8AQ9Y5S9 174 aaKnown RBP11.64□□□□□ -0.55
TRAF1-203ENST00000546084 FLT4P35916 1363 aa11.64□□□□□ -0.55
TRAF1-203ENST00000546084 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 SDF4Q9BRK5 362 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
TRAF1-203ENST00000546084 EDC4Q6P2E9 1401 aaKnown RBP11.63□□□□□ -0.55
TRAF1-203ENST00000546084 GOLGA6L19H0YKK7 550 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 CLEC17AQ6ZS10 378 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 LIMCH1Q9UPQ0 1083 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 IBTKQ9P2D0 1353 aaPredicted RBP11.63□□□□□ -0.55
TRAF1-203ENST00000546084 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
TRAF1-203ENST00000546084 ADCK5Q3MIX3 580 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
TRAF1-203ENST00000546084 BIN1O00499 593 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 CYP2E1P05181 493 aaPredicted RBP11.62□□□□□ -0.55
TRAF1-203ENST00000546084 ME1P48163 572 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 BRF1Q92994 677 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
TRAF1-203ENST00000546084 SYT1P21579 422 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
TRAF1-203ENST00000546084 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
TRAF1-203ENST00000546084 USP16Q9Y5T5 823 aa11.62□□□□□ -0.55
TRAF1-203ENST00000546084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAF1-203ENST00000546084 ZNF500O60304 480 aaPredicted RBP11.61□□□□□ -0.55
TRAF1-203ENST00000546084 POLR3DP05423 398 aaPredicted RBP11.61□□□□□ -0.55
TRAF1-203ENST00000546084 RXRAP19793 462 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 PTCH1Q13635 1447 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 ABCC3O15438 1527 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 ADGRB3O60242 1522 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 MROH2AA6NES4 1674 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 TNMDQ9H2S6 317 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 ZFYVE9O95405 1425 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 FAM135BQ49AJ0 1406 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 PPRC1Q5VV67 1664 aaKnown RBP11.61□□□□□ -0.55
TRAF1-203ENST00000546084 GRM8O00222 908 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
TRAF1-203ENST00000546084 GLI2P10070 1586 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 SETBP1Q9Y6X0 1596 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 OTUD7BQ6GQQ9 843 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 FAM177A1Q8N128 213 aaPredicted RBP11.6□□□□□ -0.55
TRAF1-203ENST00000546084 PIK3R4Q99570 1358 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 ADCY5O95622 1261 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 TFCP2Q12800 502 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 PDLIM2Q96JY6 352 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 HDAC5Q9UQL6 1122 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 DYNC1I1O14576 645 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 LARGE1O95461 756 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 A1BGP04217 495 aa11.6□□□□□ -0.55
TRAF1-203ENST00000546084 MCM5P33992 734 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms