RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CCDC171Q6TFL3 1326 aa10.48□□□□□ -0.73
TDP1-204ENST00000545686 MTX1Q13505 466 aa10.48□□□□□ -0.73
TDP1-204ENST00000545686 FOXD4L6Q3SYB3 417 aaPredicted RBP10.48□□□□□ -0.73
TDP1-204ENST00000545686 DNTTIP2Q5QJE6 756 aaKnown RBP10.48□□□□□ -0.73
TDP1-204ENST00000545686 FOXD4L3Q6VB84 417 aaPredicted RBP10.48□□□□□ -0.73
TDP1-204ENST00000545686 RASEFQ8IZ41 740 aa10.48□□□□□ -0.73
TDP1-204ENST00000545686 CASTP20810 708 aaKnown RBP10.47□□□□□ -0.73
TDP1-204ENST00000545686 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
TDP1-204ENST00000545686 CCDC94Q9BW85 323 aaPredicted RBP10.47□□□□□ -0.73
TDP1-204ENST00000545686 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
TDP1-204ENST00000545686 MTMR6Q9Y217 621 aa10.47□□□□□ -0.73
TDP1-204ENST00000545686 SIPA1L3O60292 1781 aaPredicted RBP10.47□□□□□ -0.73
TDP1-204ENST00000545686 FIBPO43427 364 aa10.47□□□□□ -0.73
TDP1-204ENST00000545686 NGDNQ8NEJ9 315 aaKnown RBP10.47□□□□□ -0.73
TDP1-204ENST00000545686 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
TDP1-204ENST00000545686 ZSWIM6Q9HCJ5 1215 aa10.47□□□□□ -0.73
TDP1-204ENST00000545686 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 ELP1O95163 1332 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 NUTM2FA1L443 756 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 GOLGA6L6A8MZA4 724 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 BEND3Q5T5X7 828 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 PLPPR3Q6T4P5 718 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 ERC1Q8IUD2 1116 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 HDAC5Q9UQL6 1122 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.73
TDP1-204ENST00000545686 OVOS2A0A0G2JMS6 1433 aa10.46□□□□□ -0.74
TDP1-204ENST00000545686 MAP4K4O95819 1239 aaPredicted RBP10.46□□□□□ -0.74
TDP1-204ENST00000545686 CCDC192P0DO97 292 aa10.46□□□□□ -0.74
TDP1-204ENST00000545686 GJB2P29033 226 aa10.46□□□□□ -0.74
TDP1-204ENST00000545686 CWC27Q6UX04 472 aaKnown RBP10.46□□□□□ -0.74
TDP1-204ENST00000545686 PHAXQ9H814 394 aaKnown RBP10.46□□□□□ -0.74
TDP1-204ENST00000545686 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.74
TDP1-204ENST00000545686 HIP1O00291 1037 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 CLASRPQ8N2M8 674 aaKnown RBP10.45□□□□□ -0.74
TDP1-204ENST00000545686 TTC12Q9H892 705 aaPredicted RBP10.45□□□□□ -0.74
TDP1-204ENST00000545686 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 LARGE1O95461 756 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 NBPF7P0C2Y1 421 aaPredicted RBP10.45□□□□□ -0.74
TDP1-204ENST00000545686 LTKP29376 864 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 CCDC83Q8IWF9 413 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 SNRKQ9NRH2 765 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 ECHDC1Q9NTX5 307 aa10.45□□□□□ -0.74
TDP1-204ENST00000545686 NFAT5O94916 1531 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 ADCY9O60503 1353 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 ZKSCAN1P17029 563 aaPredicted RBP10.44□□□□□ -0.74
TDP1-204ENST00000545686 PDCP20941 246 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 NLRP6P59044 892 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 EIF4A1P60842 406 aaKnown RBP10.44□□□□□ -0.74
TDP1-204ENST00000545686 DNM1Q05193 864 aaKnown RBP10.44□□□□□ -0.74
TDP1-204ENST00000545686 KIAA1524Q8TCG1 905 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
TDP1-204ENST00000545686 SPG7Q9UQ90 795 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 KIF3AQ9Y496 699 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 KRT85P78386 507 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 GIMAP6Q6P9H5 292 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 ALDH8A1Q9H2A2 487 aaPredicted RBP10.44□□□□□ -0.74
TDP1-204ENST00000545686 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
TDP1-204ENST00000545686 MRC1P22897 1456 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 LMTK3Q96Q04 1460 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
TDP1-204ENST00000545686 ALDH1L1O75891 902 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 CHAF1AQ13111 956 aaPredicted RBP10.43□□□□□ -0.74
TDP1-204ENST00000545686 OS9Q13438 667 aaPredicted RBP10.43□□□□□ -0.74
TDP1-204ENST00000545686 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 ZNF830Q96NB3 372 aaPredicted RBP10.43□□□□□ -0.74
TDP1-204ENST00000545686 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 ADAMTS7Q9UKP4 1686 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 PI4KAP2A4QPH2 592 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 PSMA5P28066 241 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 PTH1RQ03431 593 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 ANKRD1Q15327 319 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
TDP1-204ENST00000545686 PI4KAP1Q8N8J0 262 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 CHPF2Q9P2E5 772 aa10.43□□□□□ -0.74
TDP1-204ENST00000545686 JCADQ9P266 1359 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 ST3GAL1Q11201 340 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 MAP3K11Q16584 847 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 ME3Q16798 604 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 ADCK5Q3MIX3 580 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 PRDM4Q9UKN5 801 aa10.42□□□□□ -0.74
TDP1-204ENST00000545686 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
TDP1-204ENST00000545686 VPS37CA5D8V6 355 aaPredicted RBP10.41□□□□□ -0.74
TDP1-204ENST00000545686 IFIT2P09913 472 aaKnown RBP10.41□□□□□ -0.74
TDP1-204ENST00000545686 CPA1P15085 419 aa10.41□□□□□ -0.74
TDP1-204ENST00000545686 UTP14CQ5TAP6 766 aaKnown RBP10.41□□□□□ -0.74
TDP1-204ENST00000545686 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
TDP1-204ENST00000545686 RBM43Q6ZSC3 357 aaKnown RBP10.41□□□□□ -0.74
TDP1-204ENST00000545686 MAP4K1Q92918 833 aa10.41□□□□□ -0.74
TDP1-204ENST00000545686 SCAND2PQ9GZW5 306 aaPredicted RBP10.41□□□□□ -0.74
TDP1-204ENST00000545686 RBM8AQ9Y5S9 174 aaKnown RBP10.41□□□□□ -0.74
TDP1-204ENST00000545686 AP5Z1O43299 807 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms