RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
CCDC7-210ENST00000545067 SDF4Q9BRK5 362 aa10.34□□□□□ -0.75
CCDC7-210ENST00000545067 SBNO1A3KN83 1393 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 ATP2B1P20020 1258 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 GRM8O00222 908 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 ZSCAN22P10073 491 aaPredicted RBP10.33□□□□□ -0.76
CCDC7-210ENST00000545067 NMIQ13287 307 aaPredicted RBP10.33□□□□□ -0.76
CCDC7-210ENST00000545067 LARP1Q6PKG0 1096 aaKnown RBP10.33□□□□□ -0.76
CCDC7-210ENST00000545067 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 BICC1Q9H694 974 aaKnown RBP10.33□□□□□ -0.76
CCDC7-210ENST00000545067 MROH2AA6NES4 1674 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 ABCA9Q8IUA7 1624 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 ADCY5O95622 1261 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 PDCP20941 246 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 C17orf53Q8N3J3 647 aaPredicted RBP10.33□□□□□ -0.76
CCDC7-210ENST00000545067 SNX14Q9Y5W7 946 aa10.33□□□□□ -0.76
CCDC7-210ENST00000545067 ERBB4Q15303 1308 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 CHST3Q7LGC8 479 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 GOLIM4O00461 696 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 CCDC192P0DO97 292 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 CCDC183Q5T5S1 534 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 PRDM11Q9NQV5 511 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 TBX22Q9Y458 520 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 PTPRMP28827 1452 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 AATKQ6ZMQ8 1374 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 ME1P48163 572 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 EIF4A1P60842 406 aaKnown RBP10.32□□□□□ -0.76
CCDC7-210ENST00000545067 HAND2P61296 217 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 EVI5LQ96CN4 794 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
CCDC7-210ENST00000545067 HIP1O00291 1037 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 CCDC129Q6ZRS4 1044 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 ALKQ9UM73 1620 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 PTCH1Q13635 1447 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 SGSM2O43147 1006 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 PTH1RQ03431 593 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 ANKRD13DQ6ZTN6 518 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 IP6K1Q92551 441 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 ANAPC15P60006 121 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 FILIP1Q7Z7B0 1213 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 RALYLQ86SE5 291 aaKnown RBP10.31□□□□□ -0.76
CCDC7-210ENST00000545067 CHMP4CQ96CF2 233 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 A2ML1A8K2U0 1454 aa10.31□□□□□ -0.76
CCDC7-210ENST00000545067 TPM2P07951 284 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 BRF1Q92994 677 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
CCDC7-210ENST00000545067 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
CCDC7-210ENST00000545067 HSP90AB3PQ58FF7 597 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 ATP7BP35670 1465 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 F13A1P00488 732 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 NFXL1Q6ZNB6 911 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 NEXMIFQ5QGS0 1516 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 MYOM1P52179 1685 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 ADCK5Q3MIX3 580 aa10.3□□□□□ -0.76
CCDC7-210ENST00000545067 ARHGEF40Q8TER5 1519 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 MAP3K11Q16584 847 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
CCDC7-210ENST00000545067 CREB3L3Q68CJ9 461 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 LINS1Q8NG48 757 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 SSH3Q8TE77 659 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 ARHGAP31Q2M1Z3 1444 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 NRDCO43847 1150 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 BRD1O95696 1058 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 TRDNQ13061 729 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 USP6P35125 1406 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 KINO60870 393 aaKnown RBP10.29□□□□□ -0.76
CCDC7-210ENST00000545067 GPTP24298 496 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 UBE2HP62256 183 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
CCDC7-210ENST00000545067 TIMM10P62072 90 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 ZDHHC9Q9Y397 364 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 HSPA4P34932 840 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 ZNF445P59923 1031 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 TFCP2Q12800 502 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 CCDC57Q2TAC2 916 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 EAF2Q96CJ1 260 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-210ENST00000545067 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 TLR7Q9NYK1 1049 aaKnown RBP10.28□□□□□ -0.76
CCDC7-210ENST00000545067 CDK12Q9NYV4 1490 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-210ENST00000545067 CPS1P31327 1500 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-210ENST00000545067 LETM1O95202 739 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-210ENST00000545067 TTC39AQ5SRH9 613 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 BEND3Q5T5X7 828 aa10.28□□□□□ -0.76
CCDC7-210ENST00000545067 CCDC82Q8N4S0 544 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms