RNA–Protein interactions for RNA: ENST00000544805.1

RNF10-222, Transcript of ring finger protein 10, human

TSL 2

Gene RNF10, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-222	ENST00000544805	EMILIN3	Q9NT22	766 aa		11.27	□□□□□ -0.61
RNF10-222	ENST00000544805	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.27	□□□□□ -0.61
RNF10-222	ENST00000544805	ERBB3	P21860	1342 aa		11.27	□□□□□ -0.61
RNF10-222	ENST00000544805	SMARCA5	O60264	1052 aa	Predicted RBP	11.26	□□□□□ -0.61
RNF10-222	ENST00000544805	CCDC96	Q2M329	555 aa		11.26	□□□□□ -0.61
RNF10-222	ENST00000544805	EGFL6	Q8IUX8	553 aa		11.26	□□□□□ -0.61
RNF10-222	ENST00000544805	FBXW7	Q969H0	707 aa		11.26	□□□□□ -0.61
RNF10-222	ENST00000544805	UBA5	Q9GZZ9	404 aa		11.26	□□□□□ -0.61
RNF10-222	ENST00000544805	PPME1	Q9Y570	386 aa		11.26	□□□□□ -0.61
RNF10-222	ENST00000544805	MCCD1	P59942	119 aa	Predicted RBP	11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	EN1	Q05925	392 aa	Predicted RBP	11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	HDAC1	Q13547	482 aa	Predicted RBP	11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	DDX54	Q8TDD1	881 aa	Known RBP	11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	RAPGEF4	Q8WZA2	1011 aa		11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	NUB1	Q9Y5A7	615 aa		11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	LTN1	O94822	1766 aa		11.25	□□□□□ -0.61
RNF10-222	ENST00000544805	RGPD5	Q99666	1765 aa		11.24	□□□□□ -0.61
RNF10-222	ENST00000544805	RBM26	Q5T8P6	1007 aa	Known RBP	11.24	□□□□□ -0.61
RNF10-222	ENST00000544805	ZNF830	Q96NB3	372 aa	Predicted RBP	11.24	□□□□□ -0.61
RNF10-222	ENST00000544805	KIF7	Q2M1P5	1343 aa		11.24	□□□□□ -0.61
RNF10-222	ENST00000544805	ABCC6	O95255	1503 aa		11.24	□□□□□ -0.61
RNF10-222	ENST00000544805	THSD7A	Q9UPZ6	1657 aa		11.24	□□□□□ -0.61
RNF10-222	ENST00000544805	COL18A1	P39060	1754 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	KIF20B	Q96Q89	1820 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	HSP90AB2P	Q58FF8	381 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	FAM43A	Q8N2R8	423 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	USHBP1	Q8N6Y0	703 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	TSPAN18	Q96SJ8	248 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	MTA3	Q9BTC8	594 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	EMILIN1	Q9Y6C2	1016 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	RTL1	A6NKG5	1358 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	OVOS2	A0A0G2JMS6	1433 aa		11.23	□□□□□ -0.61
RNF10-222	ENST00000544805	HSP90AA1	P07900	732 aa	Known RBP	11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	TAT	P17735	454 aa	Predicted RBP	11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	FLT4	P35916	1363 aa		11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	MYOM1	P52179	1685 aa		11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	RBM27	Q9P2N5	1060 aa	Known RBP	11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.22	□□□□□ -0.61
RNF10-222	ENST00000544805	USP54	Q70EL1	1684 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	LIG1	P18858	919 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	NBPF14	Q5TI25	921 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	WDR78	Q5VTH9	848 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	MAMSTR	Q6ZN01	415 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	MARCH10	Q8NA82	808 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	SYTL4	Q96C24	671 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	ACSBG1	Q96GR2	724 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	TMEM51	Q9NW97	253 aa		11.21	□□□□□ -0.61
RNF10-222	ENST00000544805	NSD2	O96028	1365 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	INSR	P06213	1382 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	EZH2	Q15910	746 aa	Known RBP	11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	LONRF3	Q496Y0	759 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	NBPF6	Q5VWK0	638 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	ZCRB1	Q8TBF4	217 aa	Known RBP	11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	NBPF4	Q96M43	638 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	YY1AP1	Q9H869	796 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	SCUBE2	Q9NQ36	999 aa		11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	BSDC1	Q9NW68	430 aa	Predicted RBP	11.2	□□□□□ -0.62
RNF10-222	ENST00000544805	KIF24	Q5T7B8	1368 aa		11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	RGPD1	P0DJD0	1748 aa		11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	PARP4	Q9UKK3	1724 aa	Known RBP	11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	DPYSL4	O14531	572 aa		11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	SSR1	P43307	286 aa	Known RBP	11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	KRBA2	Q6ZNG9	492 aa		11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	POLK	Q9UBT6	870 aa		11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	RBM19	Q9Y4C8	960 aa	Known RBP	11.19	□□□□□ -0.62
RNF10-222	ENST00000544805	PSD	A5PKW4	1024 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF10-222	ENST00000544805	SLAIN1	Q8ND83	568 aa		11.18	□□□□□ -0.62
RNF10-222	ENST00000544805	SUGT1	Q9Y2Z0	365 aa		11.18	□□□□□ -0.62
RNF10-222	ENST00000544805	TNS2	Q63HR2	1409 aa		11.18	□□□□□ -0.62
RNF10-222	ENST00000544805	LRRC37A3	O60309	1634 aa		11.17	□□□□□ -0.62
RNF10-222	ENST00000544805	WASHC2A	Q641Q2	1341 aa		11.17	□□□□□ -0.62
RNF10-222	ENST00000544805	PDCL3	Q9H2J4	239 aa		11.17	□□□□□ -0.62
RNF10-222	ENST00000544805	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF10-222	ENST00000544805	SPG7	Q9UQ90	795 aa		11.17	□□□□□ -0.62
RNF10-222	ENST00000544805	ANKRD62	A6NC57	917 aa		11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	CCER2	I3L3R5	266 aa		11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	SEMA3E	O15041	775 aa		11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	ARID4A	P29374	1257 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	R3HDM1	Q15032	1099 aa	Known RBP	11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	MSL3	Q8N5Y2	521 aa	Known RBP	11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	OXER1	Q8TDS5	423 aa		11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	MORC4	Q8TE76	937 aa		11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	FAM208A	Q9UK61	1670 aa	Known RBP	11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	DISP2	A7MBM2	1401 aa		11.16	□□□□□ -0.62
RNF10-222	ENST00000544805	UTP14C	Q5TAP6	766 aa	Known RBP	11.15	□□□□□ -0.62
RNF10-222	ENST00000544805	CAMKK2	Q96RR4	588 aa		11.15	□□□□□ -0.62
RNF10-222	ENST00000544805	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.15	□□□□□ -0.62
RNF10-222	ENST00000544805	PARD3	Q8TEW0	1356 aa		11.15	□□□□□ -0.63
RNF10-222	ENST00000544805	TESPA1	A2RU30	521 aa	Predicted RBP	11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	KCNQ2	O43526	872 aa		11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	SLC34A2	O95436	690 aa		11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	MAP3K9	P80192	1104 aa		11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	SLC20A2	Q08357	652 aa		11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	EIF4A2	Q14240	407 aa	Known RBP	11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	CXorf38	Q8TB03	319 aa		11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	EYA1	Q99502	592 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms