RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
CIT-215ENST00000544800 FAM155AB1AL88 458 aaPredicted RBP10.03□□□□□ -0.8
CIT-215ENST00000544800 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
CIT-215ENST00000544800 CCDC24Q8N4L8 307 aa10.03□□□□□ -0.8
CIT-215ENST00000544800 TMOD3Q9NYL9 352 aa10.03□□□□□ -0.8
CIT-215ENST00000544800 BRCA2P51587 3418 aa10.03□□□□□ -0.8
CIT-215ENST00000544800 FER1L6Q2WGJ9 1857 aa10.02□□□□□ -0.8
CIT-215ENST00000544800 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.8
CIT-215ENST00000544800 KIAA0100Q14667 2235 aaKnown RBP10.02□□□□□ -0.81
CIT-215ENST00000544800 FZD9O00144 591 aa10.02□□□□□ -0.81
CIT-215ENST00000544800 HUNKP57058 714 aa10.02□□□□□ -0.81
CIT-215ENST00000544800 ZNF296Q8WUU4 475 aaPredicted RBP10.02□□□□□ -0.81
CIT-215ENST00000544800 CSRNP1Q96S65 589 aa10.02□□□□□ -0.81
CIT-215ENST00000544800 TTC28Q96AY4 2481 aa10.02□□□□□ -0.81
CIT-215ENST00000544800 SERPINB2P05120 415 aa10.01□□□□□ -0.81
CIT-215ENST00000544800 EN2P19622 333 aaPredicted RBP10.01□□□□□ -0.81
CIT-215ENST00000544800 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
CIT-215ENST00000544800 RGMBQ6NW40 437 aa10.01□□□□□ -0.81
CIT-215ENST00000544800 STAC3Q96MF2 364 aa10.01□□□□□ -0.81
CIT-215ENST00000544800 ATG3Q9NT62 314 aa10.01□□□□□ -0.81
CIT-215ENST00000544800 RAPGEFL1Q9UHV5 662 aa10.01□□□□□ -0.81
CIT-215ENST00000544800 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
CIT-215ENST00000544800 FAM208AQ9UK61 1670 aaKnown RBP10□□□□□ -0.81
CIT-215ENST00000544800 ZPR1O75312 459 aa10□□□□□ -0.81
CIT-215ENST00000544800 EPS15P42566 896 aa10□□□□□ -0.81
CIT-215ENST00000544800 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
CIT-215ENST00000544800 ZNF408Q9H9D4 720 aa10□□□□□ -0.81
CIT-215ENST00000544800 DLEC1Q9Y238 1755 aa10□□□□□ -0.81
CIT-215ENST00000544800 A0A1W2PPC1 479 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 NFIXQ14938 502 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 NBPF6Q5VWK0 638 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 CNKSR1Q969H4 720 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 NBPF4Q96M43 638 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
CIT-215ENST00000544800 SOX1O00570 391 aaPredicted RBP9.98□□□□□ -0.81
CIT-215ENST00000544800 PDE6BP35913 854 aa9.98□□□□□ -0.81
CIT-215ENST00000544800 NOM1Q5C9Z4 860 aaKnown RBP9.98□□□□□ -0.81
CIT-215ENST00000544800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
CIT-215ENST00000544800 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
CIT-215ENST00000544800 GLIS2Q9BZE0 524 aaPredicted RBP9.98□□□□□ -0.81
CIT-215ENST00000544800 KDRP35968 1356 aa9.98□□□□□ -0.81
CIT-215ENST00000544800 KTN1Q86UP2 1357 aaKnown RBP9.98□□□□□ -0.81
CIT-215ENST00000544800 ITGB4P16144 1822 aa9.98□□□□□ -0.81
CIT-215ENST00000544800 LTN1O94822 1766 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 ZNF157P51786 506 aaPredicted RBP9.97□□□□□ -0.81
CIT-215ENST00000544800 FKBP4Q02790 459 aaKnown RBP eCLIP9.97□□□□□ -0.81
CIT-215ENST00000544800 USPL1Q5W0Q7 1092 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 NME9Q86XW9 330 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 DEFB123Q8N688 67 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 DCAF11Q8TEB1 546 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 MPHOSPH9Q99550 1183 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 BRIP1Q9BX63 1249 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 ZNF277Q9NRM2 450 aaPredicted RBP9.97□□□□□ -0.81
CIT-215ENST00000544800 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
CIT-215ENST00000544800 PIEZO1Q92508 2521 aa9.96□□□□□ -0.81
CIT-215ENST00000544800 GABBR2O75899 941 aa9.96□□□□□ -0.82
CIT-215ENST00000544800 HOXC9P31274 260 aa9.96□□□□□ -0.82
CIT-215ENST00000544800 SCNN1DP51172 638 aa9.96□□□□□ -0.82
CIT-215ENST00000544800 USHBP1Q8N6Y0 703 aa9.96□□□□□ -0.82
CIT-215ENST00000544800 PGAP2Q9UHJ9 254 aa9.96□□□□□ -0.82
CIT-215ENST00000544800 GPR25O00155 361 aa9.95□□□□□ -0.82
CIT-215ENST00000544800 CRKLP46109 303 aaKnown RBP9.95□□□□□ -0.82
CIT-215ENST00000544800 EIF6P56537 245 aaKnown RBP9.95□□□□□ -0.82
CIT-215ENST00000544800 CCDC93Q567U6 631 aa9.95□□□□□ -0.82
CIT-215ENST00000544800 PRPF40BQ6NWY9 871 aaKnown RBP9.95□□□□□ -0.82
CIT-215ENST00000544800 CDC37L1Q7L3B6 337 aa9.95□□□□□ -0.82
CIT-215ENST00000544800 C7orf43Q8WVR3 580 aa9.95□□□□□ -0.82
CIT-215ENST00000544800 FARP1Q9Y4F1 1045 aaPredicted RBP9.95□□□□□ -0.82
CIT-215ENST00000544800 CENPJQ9HC77 1338 aaPredicted RBP9.95□□□□□ -0.82
CIT-215ENST00000544800 AKAP11Q9UKA4 1901 aa9.95□□□□□ -0.82
CIT-215ENST00000544800 LAMA3Q16787 3333 aa9.95□□□□□ -0.82
CIT-215ENST00000544800 CARMIL3Q8ND23 1372 aa9.94□□□□□ -0.82
CIT-215ENST00000544800 TBC1D8O95759 1140 aa9.94□□□□□ -0.82
CIT-215ENST00000544800 AMPHP49418 695 aa9.94□□□□□ -0.82
CIT-215ENST00000544800 STYK1Q6J9G0 422 aa9.94□□□□□ -0.82
CIT-215ENST00000544800 JDP2Q8WYK2 163 aa9.94□□□□□ -0.82
CIT-215ENST00000544800 TMEM106CQ9BVX2 250 aa9.94□□□□□ -0.82
CIT-215ENST00000544800 ADARB2Q9NS39 739 aaKnown RBP9.94□□□□□ -0.82
CIT-215ENST00000544800 SYNGAP1Q96PV0 1343 aa9.93□□□□□ -0.82
CIT-215ENST00000544800 FKTNO75072 461 aa9.93□□□□□ -0.82
CIT-215ENST00000544800 SLC10A3P09131 477 aa9.93□□□□□ -0.82
CIT-215ENST00000544800 IARSP41252 1262 aaKnown RBP9.93□□□□□ -0.82
CIT-215ENST00000544800 C2orf69Q8N8R5 385 aa9.93□□□□□ -0.82
CIT-215ENST00000544800 ZC3H15Q8WU90 426 aaKnown RBP9.93□□□□□ -0.82
CIT-215ENST00000544800 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
CIT-215ENST00000544800 EVC2Q86UK5 1308 aa9.92□□□□□ -0.82
CIT-215ENST00000544800 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
CIT-215ENST00000544800 CD44P16070 742 aaKnown RBP9.92□□□□□ -0.82
CIT-215ENST00000544800 RTKN2Q8IZC4 609 aa9.92□□□□□ -0.82
CIT-215ENST00000544800 DPF3Q92784 378 aa9.92□□□□□ -0.82
CIT-215ENST00000544800 NRXN2Q9P2S2 1712 aa9.92□□□□□ -0.82
CIT-215ENST00000544800 HTTP42858 3142 aa9.91□□□□□ -0.82
CIT-215ENST00000544800 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
CIT-215ENST00000544800 ARMC5Q96C12 935 aa9.91□□□□□ -0.82
CIT-215ENST00000544800 MASTLQ96GX5 879 aa9.91□□□□□ -0.82
CIT-215ENST00000544800 GBA2Q9HCG7 927 aaPredicted RBP9.91□□□□□ -0.82
CIT-215ENST00000544800 NARFQ9UHQ1 456 aa9.91□□□□□ -0.82
CIT-215ENST00000544800 SPG7Q9UQ90 795 aa9.91□□□□□ -0.82
CIT-215ENST00000544800 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms