RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 LRP5O75197 1615 aa12.72□□□□□ -0.37
RIMKLB-212ENST00000544257 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 SNPHO15079 494 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 AK7Q96M32 723 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 BABAM1Q9NWV8 329 aa12.71□□□□□ -0.37
RIMKLB-212ENST00000544257 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.38
RIMKLB-212ENST00000544257 PNPLA7Q6ZV29 1317 aa12.71□□□□□ -0.38
RIMKLB-212ENST00000544257 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.38
RIMKLB-212ENST00000544257 DIEXFQ68CQ4 756 aaKnown RBP12.7□□□□□ -0.38
RIMKLB-212ENST00000544257 FMNL2Q96PY5 1086 aa12.7□□□□□ -0.38
RIMKLB-212ENST00000544257 HEG1Q9ULI3 1381 aa12.7□□□□□ -0.38
RIMKLB-212ENST00000544257 APAF1O14727 1248 aa12.69□□□□□ -0.38
RIMKLB-212ENST00000544257 SSFA2P28290 1259 aa12.69□□□□□ -0.38
RIMKLB-212ENST00000544257 SLC16A10Q8TF71 515 aa12.69□□□□□ -0.38
RIMKLB-212ENST00000544257 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
RIMKLB-212ENST00000544257 TEX13AQ9BXU3 409 aaPredicted RBP12.69□□□□□ -0.38
RIMKLB-212ENST00000544257 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
RIMKLB-212ENST00000544257 NEUROD2Q15784 382 aa12.68□□□□□ -0.38
RIMKLB-212ENST00000544257 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
RIMKLB-212ENST00000544257 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
RIMKLB-212ENST00000544257 COL24A1Q17RW2 1714 aa12.67□□□□□ -0.38
RIMKLB-212ENST00000544257 GNPATO15228 680 aa12.67□□□□□ -0.38
RIMKLB-212ENST00000544257 ST18O60284 1047 aa12.67□□□□□ -0.38
RIMKLB-212ENST00000544257 CYP19A1P11511 503 aaPredicted RBP12.67□□□□□ -0.38
RIMKLB-212ENST00000544257 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
RIMKLB-212ENST00000544257 MTFR1LQ9H019 292 aa12.67□□□□□ -0.38
RIMKLB-212ENST00000544257 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 KCNQ3O43525 872 aa12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 STARD3NLO95772 234 aa12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 COL23A1Q86Y22 540 aaPredicted RBP12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 HS6ST3Q8IZP7 471 aa12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 NGEFQ8N5V2 710 aa12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 SPON1Q9HCB6 807 aa12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
RIMKLB-212ENST00000544257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
RIMKLB-212ENST00000544257 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
RIMKLB-212ENST00000544257 INTS5Q6P9B9 1019 aaKnown RBP12.65□□□□□ -0.38
RIMKLB-212ENST00000544257 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
RIMKLB-212ENST00000544257 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 TSPYL4Q9UJ04 414 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 CHL1O00533 1208 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 EIF4A1P60842 406 aaKnown RBP12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 MIS18AQ9NYP9 233 aa12.64□□□□□ -0.39
RIMKLB-212ENST00000544257 ZBTB7AO95365 584 aa12.63□□□□□ -0.39
RIMKLB-212ENST00000544257 IFT57Q9NWB7 429 aa12.63□□□□□ -0.39
RIMKLB-212ENST00000544257 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
RIMKLB-212ENST00000544257 C4AP0C0L4 1744 aa12.63□□□□□ -0.39
RIMKLB-212ENST00000544257 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
RIMKLB-212ENST00000544257 PHF14O94880 888 aa12.62□□□□□ -0.39
RIMKLB-212ENST00000544257 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
RIMKLB-212ENST00000544257 PTGER2P43116 358 aa12.62□□□□□ -0.39
RIMKLB-212ENST00000544257 GNAI1P63096 354 aa12.61□□□□□ -0.39
RIMKLB-212ENST00000544257 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
RIMKLB-212ENST00000544257 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
RIMKLB-212ENST00000544257 ZBTB1Q9Y2K1 713 aa12.61□□□□□ -0.39
RIMKLB-212ENST00000544257 IL16Q14005 1332 aa12.61□□□□□ -0.39
RIMKLB-212ENST00000544257 RFC4P35249 363 aa12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 IL6STP40189 918 aaPredicted RBP12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 COL15A1P39059 1388 aa12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 POLD1P28340 1107 aa12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
RIMKLB-212ENST00000544257 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 A0A087WZG4 1122 aa12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 PRAMEF22A3QJZ6 481 aa12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 HOXB7P09629 217 aa12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
RIMKLB-212ENST00000544257 A1BGP04217 495 aa12.58□□□□□ -0.4
RIMKLB-212ENST00000544257 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
RIMKLB-212ENST00000544257 SMIM5Q71RC9 77 aa12.58□□□□□ -0.4
RIMKLB-212ENST00000544257 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
RIMKLB-212ENST00000544257 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
RIMKLB-212ENST00000544257 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
RIMKLB-212ENST00000544257 GYS1P13807 737 aa12.57□□□□□ -0.4
RIMKLB-212ENST00000544257 ZPR1O75312 459 aa12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 ARXQ96QS3 562 aa12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 NBPF26B4DH59 902 aa12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 NBPF10Q6P3W6 841 aaKnown RBP12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 NBPF15Q8N660 670 aa12.56□□□□□ -0.4
RIMKLB-212ENST00000544257 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
RIMKLB-212ENST00000544257 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
RIMKLB-212ENST00000544257 BCORQ6W2J9 1755 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms