RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ATP10DQ9P241 1426 aa23.1■■□□□ 1.29
TSFM-208ENST00000543727 SENP3-EIF4A1A0A087X0R7 540 aa23.1■■□□□ 1.29
TSFM-208ENST00000543727 MYL6BP14649 208 aa23.1■■□□□ 1.29
TSFM-208ENST00000543727 GOLGA2Q08379 1002 aa23.1■■□□□ 1.29
TSFM-208ENST00000543727 DDR1Q08345 913 aa23.09■■□□□ 1.29
TSFM-208ENST00000543727 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
TSFM-208ENST00000543727 C8orf58Q8NAV2 365 aa23.09■■□□□ 1.29
TSFM-208ENST00000543727 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
TSFM-208ENST00000543727 CHPF2Q9P2E5 772 aa23.09■■□□□ 1.29
TSFM-208ENST00000543727 BRCA1P38398 1863 aaKnown RBP23.09■■□□□ 1.29
TSFM-208ENST00000543727 SETDB2Q96T68 719 aa23.08■■□□□ 1.29
TSFM-208ENST00000543727 DLEC1Q9Y238 1755 aa23.08■■□□□ 1.29
TSFM-208ENST00000543727 ARFGEF2Q9Y6D5 1785 aa23.07■■□□□ 1.28
TSFM-208ENST00000543727 E9PSI1 815 aa23.07■■□□□ 1.28
TSFM-208ENST00000543727 TWISTNBQ3B726 338 aaPredicted RBP23.07■■□□□ 1.28
TSFM-208ENST00000543727 TBC1D9BQ66K14 1250 aa23.07■■□□□ 1.28
TSFM-208ENST00000543727 KLHL34Q8N239 644 aa23.07■■□□□ 1.28
TSFM-208ENST00000543727 DCAF8L1A6NGE4 600 aa23.06■■□□□ 1.28
TSFM-208ENST00000543727 TGFB2P61812 414 aa23.06■■□□□ 1.28
TSFM-208ENST00000543727 N4BP2Q86UW6 1770 aaPredicted RBP23.06■■□□□ 1.28
TSFM-208ENST00000543727 PROSER3Q2NL68 480 aa23.05■■□□□ 1.28
TSFM-208ENST00000543727 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
TSFM-208ENST00000543727 ANKRD31Q8N7Z5 1873 aa23.05■■□□□ 1.28
TSFM-208ENST00000543727 IBTKQ9P2D0 1353 aaPredicted RBP23.04■■□□□ 1.28
TSFM-208ENST00000543727 ELL2O00472 640 aaPredicted RBP23.04■■□□□ 1.28
TSFM-208ENST00000543727 SERPINB2P05120 415 aa23.04■■□□□ 1.28
TSFM-208ENST00000543727 GIGYF2Q6Y7W6 1299 aaKnown RBP23.04■■□□□ 1.28
TSFM-208ENST00000543727 TTLL7Q6ZT98 887 aa23.04■■□□□ 1.28
TSFM-208ENST00000543727 TSPYL6Q8N831 410 aa23.04■■□□□ 1.28
TSFM-208ENST00000543727 HSP90AB3PQ58FF7 597 aa23.03■■□□□ 1.28
TSFM-208ENST00000543727 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
TSFM-208ENST00000543727 STK31Q9BXU1 1019 aa23.03■■□□□ 1.28
TSFM-208ENST00000543727 PXDNLA1KZ92 1463 aa23.03■■□□□ 1.28
TSFM-208ENST00000543727 BICDL1Q6ZP65 573 aa23.02■■□□□ 1.28
TSFM-208ENST00000543727 XAGE3Q8WTP9 111 aa23.02■■□□□ 1.28
TSFM-208ENST00000543727 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
TSFM-208ENST00000543727 PDZRN3Q9UPQ7 1066 aa23.02■■□□□ 1.28
TSFM-208ENST00000543727 NIP7Q9Y221 180 aaKnown RBP eCLIP23.02■■□□□ 1.28
TSFM-208ENST00000543727 ANXA1P04083 346 aa23.01■■□□□ 1.27
TSFM-208ENST00000543727 HLFQ16534 295 aa23.01■■□□□ 1.27
TSFM-208ENST00000543727 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
TSFM-208ENST00000543727 PLBD2Q8NHP8 589 aa23.01■■□□□ 1.27
TSFM-208ENST00000543727 ZBTB3Q9H5J0 574 aa23.01■■□□□ 1.27
TSFM-208ENST00000543727 ARFGEF1Q9Y6D6 1849 aa23.01■■□□□ 1.27
TSFM-208ENST00000543727 EXOSC9Q06265 439 aaKnown RBP23■■□□□ 1.27
TSFM-208ENST00000543727 CNBD1Q8NA66 436 aa23■■□□□ 1.27
TSFM-208ENST00000543727 NYXQ9GZU5 481 aa23■■□□□ 1.27
TSFM-208ENST00000543727 SLFN5Q08AF3 891 aa22.99■■□□□ 1.27
TSFM-208ENST00000543727 PARP10Q53GL7 1025 aa22.99■■□□□ 1.27
TSFM-208ENST00000543727 VAMP4O75379 141 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 DDX58O95786 925 aaKnown RBP22.98■■□□□ 1.27
TSFM-208ENST00000543727 ST5P78524 1137 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
TSFM-208ENST00000543727 TPTE2Q6XPS3 522 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 ANKRD13DQ6ZTN6 518 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 NBPF5PQ86XG9 351 aaPredicted RBP22.98■■□□□ 1.27
TSFM-208ENST00000543727 ZNF34Q8IZ26 560 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 RNF123Q5XPI4 1314 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 RIC1Q4ADV7 1423 aa22.98■■□□□ 1.27
TSFM-208ENST00000543727 NPHP1O15259 732 aa22.97■■□□□ 1.27
TSFM-208ENST00000543727 PRR5LQ6MZQ0 368 aa22.97■■□□□ 1.27
TSFM-208ENST00000543727 ZNF428Q96B54 188 aa22.97■■□□□ 1.27
TSFM-208ENST00000543727 BRIP1Q9BX63 1249 aa22.97■■□□□ 1.27
TSFM-208ENST00000543727 CHD4Q14839 1912 aa22.97■■□□□ 1.27
TSFM-208ENST00000543727 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
TSFM-208ENST00000543727 PDE6BP35913 854 aa22.95■■□□□ 1.26
TSFM-208ENST00000543727 PPP1R42Q7Z4L9 355 aa22.95■■□□□ 1.26
TSFM-208ENST00000543727 TRMT2AQ8IZ69 625 aaKnown RBP22.95■■□□□ 1.26
TSFM-208ENST00000543727 CT47B1P0C2W7 299 aaPredicted RBP22.94■■□□□ 1.26
TSFM-208ENST00000543727 TCIRG1Q13488 830 aa22.94■■□□□ 1.26
TSFM-208ENST00000543727 UBN2Q6ZU65 1347 aa22.93■■□□□ 1.26
TSFM-208ENST00000543727 HNRNPUQ00839 825 aaKnown RBP eCLIP22.93■■□□□ 1.26
TSFM-208ENST00000543727 LAMB2P55268 1798 aa22.93■■□□□ 1.26
TSFM-208ENST00000543727 SLC4A2P04920 1241 aa22.92■■□□□ 1.26
TSFM-208ENST00000543727 PHAXQ9H814 394 aaKnown RBP22.92■■□□□ 1.26
TSFM-208ENST00000543727 GRIN3BO60391 1043 aa22.91■■□□□ 1.26
TSFM-208ENST00000543727 DPEP1P16444 411 aa22.91■■□□□ 1.26
TSFM-208ENST00000543727 TRIM28Q13263 835 aaKnown RBP22.91■■□□□ 1.26
TSFM-208ENST00000543727 GPR162Q16538 588 aa22.91■■□□□ 1.26
TSFM-208ENST00000543727 RIC3Q7Z5B4 369 aa22.91■■□□□ 1.26
TSFM-208ENST00000543727 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
TSFM-208ENST00000543727 H0YIN7 160 aa22.9■■□□□ 1.26
TSFM-208ENST00000543727 GPTP24298 496 aa22.9■■□□□ 1.26
TSFM-208ENST00000543727 GTF2E1P29083 439 aaPredicted RBP22.9■■□□□ 1.26
TSFM-208ENST00000543727 PIM2Q9P1W9 311 aa22.9■■□□□ 1.26
TSFM-208ENST00000543727 TNRC6CQ9HCJ0 1690 aaKnown RBP22.9■■□□□ 1.26
TSFM-208ENST00000543727 A0A0G2JLW4 131 aa22.89■■□□□ 1.25
TSFM-208ENST00000543727 NTSR2O95665 410 aa22.89■■□□□ 1.25
TSFM-208ENST00000543727 NLRP10Q86W26 655 aa22.89■■□□□ 1.25
TSFM-208ENST00000543727 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
TSFM-208ENST00000543727 CACNA1SQ13698 1873 aa22.89■■□□□ 1.25
TSFM-208ENST00000543727 KLRG2A4D1S0 409 aaPredicted RBP22.88■■□□□ 1.25
TSFM-208ENST00000543727 KCNA3P22001 575 aa22.88■■□□□ 1.25
TSFM-208ENST00000543727 FLIIQ13045 1269 aa22.88■■□□□ 1.25
TSFM-208ENST00000543727 SUSD4Q5VX71 490 aa22.88■■□□□ 1.25
TSFM-208ENST00000543727 KSR2Q6VAB6 950 aa22.88■■□□□ 1.25
TSFM-208ENST00000543727 ISCA1Q9BUE6 129 aa22.88■■□□□ 1.25
TSFM-208ENST00000543727 UTP14AQ9BVJ6 771 aaKnown RBP22.88■■□□□ 1.25
TSFM-208ENST00000543727 C2CD5Q86YS7 1000 aa22.87■■□□□ 1.25
TSFM-208ENST00000543727 DDX60Q8IY21 1712 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms