RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-218ENST00000543654 CYP27B1O15528 508 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 TRIM27P14373 513 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 EIF4A1P60842 406 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 MVPQ14764 893 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 HDGFL1Q5TGJ6 251 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 MEX3CQ5U5Q3 659 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 BARGINQ6ZT62 677 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 UNC5CLQ8IV45 518 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 MRPL50Q8N5N7 158 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 EXOC6Q8TAG9 804 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 LGR6Q9HBX8 967 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 USP35Q9P2H5 1018 aa8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 NOB1Q9ULX3 412 aaKnown RBP8.38□□□□□ -1.07
NPIPB4-218ENST00000543654 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 NWD2Q9ULI1 1742 aa8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 LSM11P83369 360 aaKnown RBP eCLIP8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 FNBP4Q8N3X1 1017 aaPredicted RBP8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 CRISPLD2Q9H0B8 497 aa8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 CCDC9Q9Y3X0 531 aaKnown RBP8.37□□□□□ -1.07
NPIPB4-218ENST00000543654 HSPA1LP34931 641 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 VPS72Q15906 364 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 C20orf194Q5TEA3 1177 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 ZNF790Q6PG37 636 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 ITPRIPQ8IWB1 547 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 C8orf37Q96NL8 207 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 FMNL2Q96PY5 1086 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 TMOD3Q9NYL9 352 aa8.36□□□□□ -1.07
NPIPB4-218ENST00000543654 ABCC4O15439 1325 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 DDB1Q16531 1140 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 NFATC2IPQ8NCF5 419 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 DDX54Q8TDD1 881 aaKnown RBP8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 DBF4Q9UBU7 674 aaPredicted RBP8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 HEG1Q9ULI3 1381 aa8.35□□□□□ -1.07
NPIPB4-218ENST00000543654 NRAPQ86VF7 1730 aa8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 LRP6O75581 1613 aa8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 SNRPA1P09661 255 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 CCT4P50991 539 aaKnown RBP8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 KRT24Q2M2I5 525 aa8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 CENPQQ7L2Z9 268 aaPredicted RBP8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 USP21Q9UK80 565 aa8.34□□□□□ -1.07
NPIPB4-218ENST00000543654 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 KDM3BQ7LBC6 1761 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 SCN11AQ9UI33 1791 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 DDX58O95786 925 aaKnown RBP8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 RLBP1P12271 317 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 PBX2P40425 430 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 FLIIQ13045 1269 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 FKBP5Q13451 457 aaPredicted RBP8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 TEX13AQ9BXU3 409 aaPredicted RBP8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 HYPKQ9NX55 129 aa8.33□□□□□ -1.08
NPIPB4-218ENST00000543654 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 TBC1D12O60347 775 aa8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 EIF2S2P20042 333 aaKnown RBP8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 TMEM57Q8N5G2 664 aa8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 OXER1Q8TDS5 423 aa8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 RWDD1Q9H446 243 aaPredicted RBP8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 HDAC5Q9UQL6 1122 aa8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.32□□□□□ -1.08
NPIPB4-218ENST00000543654 A0A0G2JS52 829 aa8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 PDE4AP27815 886 aa8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 MYT1Q01538 1121 aa8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 VSIG10Q8N0Z9 540 aa8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 FBXO41Q8TF61 875 aa8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 ZNF496Q96IT1 587 aaPredicted RBP8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 TRPC5Q9UL62 973 aaPredicted RBP8.31□□□□□ -1.08
NPIPB4-218ENST00000543654 AFF2P51816 1311 aa8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 SIPA1L3O60292 1781 aaPredicted RBP8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 PSDA5PKW4 1024 aaPredicted RBP8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 ARHGAP33O14559 1287 aa8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 TCERG1O14776 1098 aaKnown RBP8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 KCNQ3O43525 872 aa8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 SLC39A6Q13433 755 aa8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 LARP6Q9BRS8 491 aaKnown RBP8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 CHPF2Q9P2E5 772 aa8.3□□□□□ -1.08
NPIPB4-218ENST00000543654 BCL9O00512 1426 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 RGS12O14924 1447 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 STARD3NLO95772 234 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 GNAI3P08754 354 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 PTGER2P43116 358 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 PSEN2P49810 448 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 FAM98CQ17RN3 349 aaKnown RBP8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 NECTIN2Q92692 538 aa8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 SMARCC1Q92922 1105 aaPredicted RBP8.29□□□□□ -1.08
NPIPB4-218ENST00000543654 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms