RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 CBLBQ13191 982 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 CSPP1Q1MSJ5 1256 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 POGKQ9P215 609 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 TRAK1Q9UPV9 953 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 EMILIN1Q9Y6C2 1016 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 TMEM2Q9UHN6 1383 aa6.93□□□□□ -1.3
SPARCL1-210ENST00000543631 SLC35F4A4IF30 521 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 UPP2O95045 317 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 SLURP2P0DP57 97 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 VASH1Q7L8A9 365 aaPredicted RBP6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 CCDC155Q8N6L0 562 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 CENPJQ9HC77 1338 aaPredicted RBP6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 CCDC7Q96M83 1385 aa6.92□□□□□ -1.3
SPARCL1-210ENST00000543631 CEP170BQ9Y4F5 1589 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 ERFEQ4G0M1 354 aa6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 TMEM132EQ6IEE7 984 aa6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 ANKLE2Q86XL3 938 aa6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 STK26Q9P289 416 aa6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 PTPRMP28827 1452 aa6.91□□□□□ -1.3
SPARCL1-210ENST00000543631 ALKQ9UM73 1620 aa6.9□□□□□ -1.3
SPARCL1-210ENST00000543631 ZNF142P52746 1687 aaPredicted RBP6.9□□□□□ -1.3
SPARCL1-210ENST00000543631 FIGNL2A6NMB9 653 aa6.9□□□□□ -1.3
SPARCL1-210ENST00000543631 KIF7Q2M1P5 1343 aa6.9□□□□□ -1.3
SPARCL1-210ENST00000543631 WASHC2AQ641Q2 1341 aa6.9□□□□□ -1.3
SPARCL1-210ENST00000543631 QRICH2Q9H0J4 1663 aa6.9□□□□□ -1.31
SPARCL1-210ENST00000543631 SENP3-EIF4A1A0A087X0R7 540 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 MAGEB6P1A0A0J9YX57 407 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 NBPF14Q5TI25 921 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 ARMC2Q8NEN0 867 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 OCSTAMPQ9BR26 566 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 EVC2Q86UK5 1308 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 PLEKHG1Q9ULL1 1385 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 SLIT1O75093 1534 aa6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 ARHGEF28Q8N1W1 1705 aaKnown RBP6.89□□□□□ -1.31
SPARCL1-210ENST00000543631 YTHDC2Q9H6S0 1430 aaKnown RBP6.88□□□□□ -1.31
SPARCL1-210ENST00000543631 ITGA6P23229 1130 aa6.88□□□□□ -1.31
SPARCL1-210ENST00000543631 ADGRB1O14514 1584 aa6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 DIP2AQ14689 1571 aa6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 SBNO2Q9Y2G9 1366 aa6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 CTSOP43234 321 aaPredicted RBP6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 SRPK2P78362 688 aaKnown RBP6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 SAFB2Q14151 953 aaKnown RBP eCLIP6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 TSC1Q92574 1164 aa6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 TESK2Q96S53 571 aa6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 CARD14Q9BXL6 1004 aa6.87□□□□□ -1.31
SPARCL1-210ENST00000543631 ARHGAP23Q9P227 1491 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 LRPPRCP42704 1394 aaKnown RBP6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 LTKP29376 864 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 SVOPQ8N4V2 548 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 TMC1Q8TDI8 760 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 GPKOWQ92917 476 aaPredicted RBP eCLIP6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 PRAM1Q96QH2 718 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 SLC26A8Q96RN1 970 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 KNSTRNQ9Y448 316 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 TBX22Q9Y458 520 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 DNMT3AQ9Y6K1 912 aaPredicted RBP6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 KNDC1Q76NI1 1749 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 DLC1Q96QB1 1528 aa6.86□□□□□ -1.31
SPARCL1-210ENST00000543631 ABCC11Q96J66 1382 aa6.85□□□□□ -1.31
SPARCL1-210ENST00000543631 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
SPARCL1-210ENST00000543631 INTS6LQ5JSJ4 861 aaKnown RBP6.85□□□□□ -1.31
SPARCL1-210ENST00000543631 VWA5B2Q8N398 1253 aa6.85□□□□□ -1.31
SPARCL1-210ENST00000543631 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
SPARCL1-210ENST00000543631 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
SPARCL1-210ENST00000543631 SETD1AO15047 1707 aaKnown RBP6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 ATAD2Q6PL18 1390 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 PIK3R4Q99570 1358 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 DISP3Q9P2K9 1392 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 NRXN3Q9Y4C0 1643 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 NUTM2BA6NNL0 878 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 NUTM2EB1AL46 878 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 CTDSPL2Q05D32 466 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 GAS6Q14393 721 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 NUTM2AQ8IVF1 878 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 RNF217Q8TC41 542 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 SIRT1Q96EB6 747 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 KCTD15Q96SI1 283 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 INSM2Q96T92 566 aaPredicted RBP6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 AMOTL2Q9Y2J4 779 aa6.84□□□□□ -1.31
SPARCL1-210ENST00000543631 KTN1Q86UP2 1357 aaKnown RBP6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 CCER2I3L3R5 266 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 ITGB2P05107 769 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 IRS1P35568 1242 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 PDXDC2PQ6P474 469 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 HDGFL2Q7Z4V5 671 aaPredicted RBP6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 C14orf37Q86TY3 774 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 AK7Q96M32 723 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 PANK3Q9H999 370 aa6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
SPARCL1-210ENST00000543631 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms