RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 YY1P25490 414 aa14.31□□□□□ -0.12
DDB1-222ENST00000543627 TGFB2P61812 414 aa14.31□□□□□ -0.12
DDB1-222ENST00000543627 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
DDB1-222ENST00000543627 ZNF428Q96B54 188 aa14.31□□□□□ -0.12
DDB1-222ENST00000543627 CHPF2Q9P2E5 772 aa14.31□□□□□ -0.12
DDB1-222ENST00000543627 TCERG1O14776 1098 aaKnown RBP14.3□□□□□ -0.12
DDB1-222ENST00000543627 COPS6Q7L5N1 327 aa14.3□□□□□ -0.12
DDB1-222ENST00000543627 MIER1Q8N108 512 aa14.3□□□□□ -0.12
DDB1-222ENST00000543627 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
DDB1-222ENST00000543627 XAGE3Q8WTP9 111 aa14.3□□□□□ -0.12
DDB1-222ENST00000543627 GRIN3BO60391 1043 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 ST5P78524 1137 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 PDIA6Q15084 440 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 C2CD5Q86YS7 1000 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 CNBD1Q8NA66 436 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 MAP3K15Q6ZN16 1313 aa14.29□□□□□ -0.12
DDB1-222ENST00000543627 LAMB4A4D0S4 1761 aa14.28□□□□□ -0.12
DDB1-222ENST00000543627 H0YIN7 160 aa14.28□□□□□ -0.12
DDB1-222ENST00000543627 ERBB4Q15303 1308 aa14.28□□□□□ -0.12
DDB1-222ENST00000543627 PRR5LQ6MZQ0 368 aa14.28□□□□□ -0.12
DDB1-222ENST00000543627 CARMIL3Q8ND23 1372 aa14.28□□□□□ -0.12
DDB1-222ENST00000543627 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDB1-222ENST00000543627 DDX21Q9NR30 783 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDB1-222ENST00000543627 PIM2Q9P1W9 311 aa14.28□□□□□ -0.12
DDB1-222ENST00000543627 GOLGB1Q14789 3259 aaKnown RBP14.28□□□□□ -0.12
DDB1-222ENST00000543627 C10orf71Q711Q0 1435 aa14.27□□□□□ -0.12
DDB1-222ENST00000543627 CCER2I3L3R5 266 aa14.27□□□□□ -0.13
DDB1-222ENST00000543627 TPTE2Q6XPS3 522 aa14.27□□□□□ -0.13
DDB1-222ENST00000543627 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.13
DDB1-222ENST00000543627 TSPYL6Q8N831 410 aa14.27□□□□□ -0.13
DDB1-222ENST00000543627 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.13
DDB1-222ENST00000543627 DBF4Q9UBU7 674 aaPredicted RBP14.27□□□□□ -0.13
DDB1-222ENST00000543627 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.13
DDB1-222ENST00000543627 ERVV-1B6SEH8 477 aa14.26□□□□□ -0.13
DDB1-222ENST00000543627 HOXB7P09629 217 aa14.26□□□□□ -0.13
DDB1-222ENST00000543627 DALRD3Q5D0E6 543 aaKnown RBP14.26□□□□□ -0.13
DDB1-222ENST00000543627 WDR63Q8IWG1 891 aa14.26□□□□□ -0.13
DDB1-222ENST00000543627 PXDNLA1KZ92 1463 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 KCNA3P22001 575 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 PDE6BP35913 854 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 TWISTNBQ3B726 338 aaPredicted RBP14.25□□□□□ -0.13
DDB1-222ENST00000543627 CCDC30Q5VVM6 783 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 RIC3Q7Z5B4 369 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 NUTM1Q86Y26 1132 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 UTRNP46939 3433 aa14.25□□□□□ -0.13
DDB1-222ENST00000543627 EXOSC9Q06265 439 aaKnown RBP14.24□□□□□ -0.13
DDB1-222ENST00000543627 GIGYF2Q6Y7W6 1299 aaKnown RBP14.24□□□□□ -0.13
DDB1-222ENST00000543627 BRIP1Q9BX63 1249 aa14.24□□□□□ -0.13
DDB1-222ENST00000543627 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
DDB1-222ENST00000543627 PHAXQ9H814 394 aaKnown RBP14.24□□□□□ -0.13
DDB1-222ENST00000543627 AFDNP55196 1824 aaKnown RBP14.24□□□□□ -0.13
DDB1-222ENST00000543627 SCN7AQ01118 1682 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 IL16Q14005 1332 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 ANKRD13DQ6ZTN6 518 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 LRP10Q7Z4F1 713 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
DDB1-222ENST00000543627 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
DDB1-222ENST00000543627 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
DDB1-222ENST00000543627 ERFEQ4G0M1 354 aa14.22□□□□□ -0.13
DDB1-222ENST00000543627 PPP1R42Q7Z4L9 355 aa14.22□□□□□ -0.13
DDB1-222ENST00000543627 TTLL6Q8N841 843 aa14.22□□□□□ -0.13
DDB1-222ENST00000543627 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
DDB1-222ENST00000543627 MYH16Q9H6N6 1097 aa14.22□□□□□ -0.13
DDB1-222ENST00000543627 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
DDB1-222ENST00000543627 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.13
DDB1-222ENST00000543627 ZNF34Q8IZ26 560 aa14.21□□□□□ -0.13
DDB1-222ENST00000543627 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
DDB1-222ENST00000543627 BCORQ6W2J9 1755 aa14.21□□□□□ -0.13
DDB1-222ENST00000543627 UBN2Q6ZU65 1347 aa14.2□□□□□ -0.14
DDB1-222ENST00000543627 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
DDB1-222ENST00000543627 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
DDB1-222ENST00000543627 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
DDB1-222ENST00000543627 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
DDB1-222ENST00000543627 RGL2O15211 777 aa14.19□□□□□ -0.14
DDB1-222ENST00000543627 DDX58O95786 925 aaKnown RBP14.19□□□□□ -0.14
DDB1-222ENST00000543627 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
DDB1-222ENST00000543627 ZNF526Q8TF50 670 aaPredicted RBP14.19□□□□□ -0.14
DDB1-222ENST00000543627 MASTLQ96GX5 879 aa14.19□□□□□ -0.14
DDB1-222ENST00000543627 MYD88Q99836 296 aa14.19□□□□□ -0.14
DDB1-222ENST00000543627 TRMT112Q9UI30 125 aaKnown RBP14.19□□□□□ -0.14
DDB1-222ENST00000543627 NUP98P52948 1817 aa14.19□□□□□ -0.14
DDB1-222ENST00000543627 KIF13BQ9NQT8 1826 aa14.19□□□□□ -0.14
DDB1-222ENST00000543627 C21orf2O43822 256 aa14.18□□□□□ -0.14
DDB1-222ENST00000543627 PDZRN3Q9UPQ7 1066 aa14.18□□□□□ -0.14
DDB1-222ENST00000543627 VAMP4O75379 141 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 SRGNP10124 158 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 HCLS1P14317 486 aaPredicted RBP14.17□□□□□ -0.14
DDB1-222ENST00000543627 G2E3Q7L622 706 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 RPGRQ92834 1020 aaKnown RBP14.17□□□□□ -0.14
DDB1-222ENST00000543627 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 MAP3K2Q9Y2U5 619 aa14.17□□□□□ -0.14
DDB1-222ENST00000543627 NRXN2Q9P2S2 1712 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms