RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 ANAPC15P60006 121 aa16.96■□□□□ 0.3
MSH2-206ENST00000543555 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.3
MSH2-206ENST00000543555 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
MSH2-206ENST00000543555 EPB41L2O43491 1005 aaKnown RBP16.95■□□□□ 0.3
MSH2-206ENST00000543555 CLEC17AQ6ZS10 378 aa16.95■□□□□ 0.3
MSH2-206ENST00000543555 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
MSH2-206ENST00000543555 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
MSH2-206ENST00000543555 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
MSH2-206ENST00000543555 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
MSH2-206ENST00000543555 PTMSP20962 102 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 NEK4P51957 841 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 L1TD1Q5T7N2 865 aaKnown RBP16.94■□□□□ 0.3
MSH2-206ENST00000543555 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 CWC22Q9HCG8 908 aaKnown RBP16.94■□□□□ 0.3
MSH2-206ENST00000543555 IGKV5-2P06315 115 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 MYL6BP14649 208 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 NUCB2P80303 420 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
MSH2-206ENST00000543555 IL17RAQ96F46 866 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 IL25Q9H293 177 aa16.94■□□□□ 0.3
MSH2-206ENST00000543555 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
MSH2-206ENST00000543555 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
MSH2-206ENST00000543555 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
MSH2-206ENST00000543555 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
MSH2-206ENST00000543555 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
MSH2-206ENST00000543555 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
MSH2-206ENST00000543555 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
MSH2-206ENST00000543555 FSD2A1L4K1 749 aa16.92■□□□□ 0.3
MSH2-206ENST00000543555 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
MSH2-206ENST00000543555 MCM2P49736 904 aa16.92■□□□□ 0.3
MSH2-206ENST00000543555 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
MSH2-206ENST00000543555 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
MSH2-206ENST00000543555 AK9Q5TCS8 1911 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 ZGPATQ8N5A5 531 aaKnown RBP16.91■□□□□ 0.3
MSH2-206ENST00000543555 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 SKOR2Q2VWA4 1001 aaPredicted RBP16.91■□□□□ 0.3
MSH2-206ENST00000543555 LRP10Q7Z4F1 713 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 GOLGA6L3A6NEY3 463 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 SGSM2O43147 1006 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
MSH2-206ENST00000543555 METTL22Q9BUU2 404 aaPredicted RBP16.91■□□□□ 0.3
MSH2-206ENST00000543555 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
MSH2-206ENST00000543555 CABP4P57796 275 aa16.9■□□□□ 0.3
MSH2-206ENST00000543555 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
MSH2-206ENST00000543555 HSPA4P34932 840 aa16.9■□□□□ 0.3
MSH2-206ENST00000543555 TMX3Q96JJ7 454 aa16.9■□□□□ 0.3
MSH2-206ENST00000543555 PARP4Q9UKK3 1724 aaKnown RBP16.89■□□□□ 0.3
MSH2-206ENST00000543555 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
MSH2-206ENST00000543555 GCKRQ14397 625 aa16.89■□□□□ 0.29
MSH2-206ENST00000543555 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
MSH2-206ENST00000543555 MYD88Q99836 296 aa16.89■□□□□ 0.29
MSH2-206ENST00000543555 COL16A1Q07092 1604 aaPredicted RBP16.89■□□□□ 0.29
MSH2-206ENST00000543555 EP400Q96L91 3159 aa16.89■□□□□ 0.29
MSH2-206ENST00000543555 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
MSH2-206ENST00000543555 RAD50Q92878 1312 aa16.89■□□□□ 0.29
MSH2-206ENST00000543555 AHDC1Q5TGY3 1603 aaPredicted RBP16.89■□□□□ 0.29
MSH2-206ENST00000543555 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
MSH2-206ENST00000543555 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
MSH2-206ENST00000543555 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
MSH2-206ENST00000543555 PKP1Q13835 747 aa16.88■□□□□ 0.29
MSH2-206ENST00000543555 SASH1O94885 1247 aa16.88■□□□□ 0.29
MSH2-206ENST00000543555 G3BP1Q13283 466 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■□□ 17.2
MSH2-206ENST00000543555 AACSQ86V21 672 aa16.88■□□□□ 0.29
MSH2-206ENST00000543555 GLI3P10071 1580 aa16.87■□□□□ 0.29
MSH2-206ENST00000543555 LSG1Q9H089 658 aaKnown RBP16.87■□□□□ 0.29
MSH2-206ENST00000543555 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
MSH2-206ENST00000543555 CUL4AQ13619 759 aa16.86■□□□□ 0.29
MSH2-206ENST00000543555 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
MSH2-206ENST00000543555 CWC27Q6UX04 472 aaKnown RBP16.86■□□□□ 0.29
MSH2-206ENST00000543555 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
MSH2-206ENST00000543555 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
MSH2-206ENST00000543555 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
MSH2-206ENST00000543555 LAMB4A4D0S4 1761 aa16.85■□□□□ 0.29
MSH2-206ENST00000543555 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
MSH2-206ENST00000543555 DIAPH3Q9NSV4 1193 aa16.85■□□□□ 0.29
MSH2-206ENST00000543555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
MSH2-206ENST00000543555 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
MSH2-206ENST00000543555 A0A0G2JS52 829 aa16.85■□□□□ 0.29
MSH2-206ENST00000543555 XRCC6P12956 609 aaKnown RBP eCLIP16.85■□□□□ 0.29
MSH2-206ENST00000543555 EPHA10Q5JZY3 1008 aa16.85■□□□□ 0.29
MSH2-206ENST00000543555 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
MSH2-206ENST00000543555 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
MSH2-206ENST00000543555 ARXQ96QS3 562 aa16.85■□□□□ 0.29
MSH2-206ENST00000543555 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
MSH2-206ENST00000543555 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
MSH2-206ENST00000543555 RUFY2Q8WXA3 655 aa16.84■□□□□ 0.29
MSH2-206ENST00000543555 EVI5LQ96CN4 794 aa16.84■□□□□ 0.29
MSH2-206ENST00000543555 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
MSH2-206ENST00000543555 SIL1Q9H173 461 aa16.83■□□□□ 0.29
MSH2-206ENST00000543555 SNX14Q9Y5W7 946 aa16.83■□□□□ 0.29
MSH2-206ENST00000543555 MCTP1Q6DN14 999 aa16.83■□□□□ 0.28
MSH2-206ENST00000543555 ARFGEF2Q9Y6D5 1785 aa16.83■□□□□ 0.28
MSH2-206ENST00000543555 NOL8Q76FK4 1167 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms