RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CLEC4GQ6UXB4 293 aa14.73□□□□□ -0.05
COPS7A-217ENST00000543537 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
COPS7A-217ENST00000543537 GNAI1P63096 354 aa14.72□□□□□ -0.05
COPS7A-217ENST00000543537 DALRD3Q5D0E6 543 aaKnown RBP14.72□□□□□ -0.05
COPS7A-217ENST00000543537 BABAM1Q9NWV8 329 aa14.72□□□□□ -0.05
COPS7A-217ENST00000543537 PDZRN3Q9UPQ7 1066 aa14.72□□□□□ -0.05
COPS7A-217ENST00000543537 KDM3BQ7LBC6 1761 aa14.72□□□□□ -0.05
COPS7A-217ENST00000543537 CARMIL3Q8ND23 1372 aa14.72□□□□□ -0.05
COPS7A-217ENST00000543537 BCORQ6W2J9 1755 aa14.71□□□□□ -0.05
COPS7A-217ENST00000543537 C1QTNF8P60827 252 aa14.71□□□□□ -0.05
COPS7A-217ENST00000543537 NEUROD2Q15784 382 aa14.71□□□□□ -0.05
COPS7A-217ENST00000543537 TBC1D9BQ66K14 1250 aa14.71□□□□□ -0.05
COPS7A-217ENST00000543537 WWC3Q9ULE0 1092 aa14.71□□□□□ -0.05
COPS7A-217ENST00000543537 TBC1D2BQ9UPU7 963 aa14.71□□□□□ -0.05
COPS7A-217ENST00000543537 NBPF26B4DH59 902 aa14.7□□□□□ -0.06
COPS7A-217ENST00000543537 GIGYF1O75420 1035 aaPredicted RBP14.7□□□□□ -0.06
COPS7A-217ENST00000543537 CHRNA5P30532 468 aa14.7□□□□□ -0.06
COPS7A-217ENST00000543537 EIF4A1P60842 406 aaKnown RBP14.7□□□□□ -0.06
COPS7A-217ENST00000543537 PDE3AQ14432 1141 aa14.7□□□□□ -0.06
COPS7A-217ENST00000543537 NBPF10Q6P3W6 841 aaKnown RBP14.7□□□□□ -0.06
COPS7A-217ENST00000543537 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
COPS7A-217ENST00000543537 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
COPS7A-217ENST00000543537 NBPF15Q8N660 670 aa14.7□□□□□ -0.06
COPS7A-217ENST00000543537 IFT57Q9NWB7 429 aa14.7□□□□□ -0.06
COPS7A-217ENST00000543537 DLEC1Q9Y238 1755 aa14.7□□□□□ -0.06
COPS7A-217ENST00000543537 BRIP1Q9BX63 1249 aa14.69□□□□□ -0.06
COPS7A-217ENST00000543537 LAMB4A4D0S4 1761 aa14.69□□□□□ -0.06
COPS7A-217ENST00000543537 PRR5LQ6MZQ0 368 aa14.68□□□□□ -0.06
COPS7A-217ENST00000543537 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
COPS7A-217ENST00000543537 CHMP4BQ9H444 224 aaKnown RBP14.68□□□□□ -0.06
COPS7A-217ENST00000543537 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
COPS7A-217ENST00000543537 TRIM35Q9UPQ4 493 aa14.68□□□□□ -0.06
COPS7A-217ENST00000543537 ZNF652Q9Y2D9 606 aa14.68□□□□□ -0.06
COPS7A-217ENST00000543537 ERBB4Q15303 1308 aa14.67□□□□□ -0.06
COPS7A-217ENST00000543537 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
COPS7A-217ENST00000543537 ARHGAP27Q6ZUM4 889 aa14.67□□□□□ -0.06
COPS7A-217ENST00000543537 THUMPD2Q9BTF0 503 aaKnown RBP14.67□□□□□ -0.06
COPS7A-217ENST00000543537 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-217ENST00000543537 ZNF330Q9Y3S2 320 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-217ENST00000543537 H0YIN7 160 aa14.66□□□□□ -0.06
COPS7A-217ENST00000543537 PDE6BP35913 854 aa14.66□□□□□ -0.06
COPS7A-217ENST00000543537 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
COPS7A-217ENST00000543537 BICDL1Q6ZP65 573 aa14.66□□□□□ -0.06
COPS7A-217ENST00000543537 TTLL6Q8N841 843 aa14.66□□□□□ -0.06
COPS7A-217ENST00000543537 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
COPS7A-217ENST00000543537 ANKRD31Q8N7Z5 1873 aa14.65□□□□□ -0.06
COPS7A-217ENST00000543537 KLRG2A4D1S0 409 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-217ENST00000543537 ERVV-1B6SEH8 477 aa14.65□□□□□ -0.06
COPS7A-217ENST00000543537 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-217ENST00000543537 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-217ENST00000543537 C2CD5Q86YS7 1000 aa14.65□□□□□ -0.06
COPS7A-217ENST00000543537 CNBD1Q8NA66 436 aa14.65□□□□□ -0.06
COPS7A-217ENST00000543537 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
COPS7A-217ENST00000543537 ZC3H4Q9UPT8 1303 aaKnown RBP14.65□□□□□ -0.06
COPS7A-217ENST00000543537 C9orf131Q5VYM1 1079 aa14.63□□□□□ -0.07
COPS7A-217ENST00000543537 LRP10Q7Z4F1 713 aa14.63□□□□□ -0.07
COPS7A-217ENST00000543537 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
COPS7A-217ENST00000543537 CHL1O00533 1208 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 KIF3CO14782 793 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 SBF1O95248 1867 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 SRGNP10124 158 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 ST5P78524 1137 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 STYK1Q6J9G0 422 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 CCDC136Q96JN2 1154 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 MAP3K15Q6ZN16 1313 aa14.62□□□□□ -0.07
COPS7A-217ENST00000543537 IBTKQ9P2D0 1353 aaPredicted RBP14.61□□□□□ -0.07
COPS7A-217ENST00000543537 ZNF853P0CG23 659 aa14.61□□□□□ -0.07
COPS7A-217ENST00000543537 RARSP54136 660 aaKnown RBP14.61□□□□□ -0.07
COPS7A-217ENST00000543537 HLFQ16534 295 aa14.61□□□□□ -0.07
COPS7A-217ENST00000543537 TPTE2Q6XPS3 522 aa14.61□□□□□ -0.07
COPS7A-217ENST00000543537 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
COPS7A-217ENST00000543537 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
COPS7A-217ENST00000543537 FANCIQ9NVI1 1328 aa14.61□□□□□ -0.07
COPS7A-217ENST00000543537 COL11A2P13942 1736 aaPredicted RBP14.61□□□□□ -0.07
COPS7A-217ENST00000543537 PDIA6Q15084 440 aa14.6□□□□□ -0.07
COPS7A-217ENST00000543537 NBPF5PQ86XG9 351 aaPredicted RBP14.6□□□□□ -0.07
COPS7A-217ENST00000543537 ARHGAP45Q92619 1136 aa14.6□□□□□ -0.07
COPS7A-217ENST00000543537 CNKSR1Q969H4 720 aa14.6□□□□□ -0.07
COPS7A-217ENST00000543537 MASTLQ96GX5 879 aa14.6□□□□□ -0.07
COPS7A-217ENST00000543537 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
COPS7A-217ENST00000543537 LTBP3Q9NS15 1303 aa14.6□□□□□ -0.07
COPS7A-217ENST00000543537 RIC1Q4ADV7 1423 aa14.59□□□□□ -0.07
COPS7A-217ENST00000543537 NFKBIEO00221 500 aa14.59□□□□□ -0.07
COPS7A-217ENST00000543537 LMNB1P20700 586 aa14.59□□□□□ -0.07
COPS7A-217ENST00000543537 ARFGEF2Q9Y6D5 1785 aa14.58□□□□□ -0.08
COPS7A-217ENST00000543537 HOXB7P09629 217 aa14.58□□□□□ -0.08
COPS7A-217ENST00000543537 PRELPP51888 382 aa14.58□□□□□ -0.08
COPS7A-217ENST00000543537 TTLL7Q6ZT98 887 aa14.58□□□□□ -0.08
COPS7A-217ENST00000543537 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.08
COPS7A-217ENST00000543537 C7orf43Q8WVR3 580 aa14.58□□□□□ -0.08
COPS7A-217ENST00000543537 ZNF622Q969S3 477 aaKnown RBP eCLIP14.58□□□□□ -0.08
COPS7A-217ENST00000543537 RNF181Q9P0P0 153 aa14.58□□□□□ -0.08
COPS7A-217ENST00000543537 NPR1P16066 1061 aa14.57□□□□□ -0.08
COPS7A-217ENST00000543537 CRY2Q49AN0 593 aa14.57□□□□□ -0.08
COPS7A-217ENST00000543537 SOGA3Q5TF21 947 aa14.57□□□□□ -0.08
COPS7A-217ENST00000543537 ZKSCAN2Q63HK3 967 aa14.57□□□□□ -0.08
COPS7A-217ENST00000543537 GIGYF2Q6Y7W6 1299 aaKnown RBP14.57□□□□□ -0.08
COPS7A-217ENST00000543537 KIF6Q6ZMV9 814 aa14.57□□□□□ -0.08
COPS7A-217ENST00000543537 ZNF34Q8IZ26 560 aa14.57□□□□□ -0.08
COPS7A-217ENST00000543537 CCDC24Q8N4L8 307 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms