RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 EIF2S2P20042 333 aaKnown RBP12.83□□□□□ -0.36
VEGFB-204ENST00000543462 TM4SF1P30408 202 aa12.83□□□□□ -0.36
VEGFB-204ENST00000543462 HNRNPUQ00839 825 aaKnown RBP eCLIP12.83□□□□□ -0.36
VEGFB-204ENST00000543462 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
VEGFB-204ENST00000543462 DZIP3Q86Y13 1208 aaKnown RBP12.83□□□□□ -0.36
VEGFB-204ENST00000543462 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.36
VEGFB-204ENST00000543462 MAP3K15Q6ZN16 1313 aa12.83□□□□□ -0.36
VEGFB-204ENST00000543462 ERVV-1B6SEH8 477 aa12.82□□□□□ -0.36
VEGFB-204ENST00000543462 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
VEGFB-204ENST00000543462 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
VEGFB-204ENST00000543462 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
VEGFB-204ENST00000543462 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
VEGFB-204ENST00000543462 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
VEGFB-204ENST00000543462 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
VEGFB-204ENST00000543462 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
VEGFB-204ENST00000543462 MSH5O43196 834 aa12.81□□□□□ -0.36
VEGFB-204ENST00000543462 MMP10P09238 476 aa12.81□□□□□ -0.36
VEGFB-204ENST00000543462 MYL6BP14649 208 aa12.81□□□□□ -0.36
VEGFB-204ENST00000543462 NFIXQ14938 502 aa12.81□□□□□ -0.36
VEGFB-204ENST00000543462 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
VEGFB-204ENST00000543462 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 ZPR1O75312 459 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 HLFQ16534 295 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 XAGE3Q8WTP9 111 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 ADCY9O60503 1353 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 CARMIL3Q8ND23 1372 aa12.8□□□□□ -0.36
VEGFB-204ENST00000543462 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
VEGFB-204ENST00000543462 CACNA1SQ13698 1873 aa12.79□□□□□ -0.36
VEGFB-204ENST00000543462 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
VEGFB-204ENST00000543462 ARXQ96QS3 562 aa12.79□□□□□ -0.36
VEGFB-204ENST00000543462 HYPKQ9NX55 129 aa12.79□□□□□ -0.36
VEGFB-204ENST00000543462 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
VEGFB-204ENST00000543462 MYH3P11055 1940 aa12.79□□□□□ -0.36
VEGFB-204ENST00000543462 POLD1P28340 1107 aa12.78□□□□□ -0.36
VEGFB-204ENST00000543462 GIGYF2Q6Y7W6 1299 aaKnown RBP12.78□□□□□ -0.36
VEGFB-204ENST00000543462 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
VEGFB-204ENST00000543462 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
VEGFB-204ENST00000543462 PHAXQ9H814 394 aaKnown RBP12.78□□□□□ -0.36
VEGFB-204ENST00000543462 UBN2Q6ZU65 1347 aa12.78□□□□□ -0.36
VEGFB-204ENST00000543462 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.37
VEGFB-204ENST00000543462 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
VEGFB-204ENST00000543462 G2E3Q7L622 706 aa12.77□□□□□ -0.37
VEGFB-204ENST00000543462 PLBD2Q8NHP8 589 aa12.77□□□□□ -0.37
VEGFB-204ENST00000543462 ZNF428Q96B54 188 aa12.77□□□□□ -0.37
VEGFB-204ENST00000543462 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.37
VEGFB-204ENST00000543462 FHDC1Q9C0D6 1143 aaPredicted RBP12.76□□□□□ -0.37
VEGFB-204ENST00000543462 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
VEGFB-204ENST00000543462 TCERG1O14776 1098 aaKnown RBP12.75□□□□□ -0.37
VEGFB-204ENST00000543462 BRPF1P55201 1214 aaPredicted RBP12.75□□□□□ -0.37
VEGFB-204ENST00000543462 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
VEGFB-204ENST00000543462 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
VEGFB-204ENST00000543462 CD2APQ9Y5K6 639 aa12.75□□□□□ -0.37
VEGFB-204ENST00000543462 FLIIQ13045 1269 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
VEGFB-204ENST00000543462 NTSR2O95665 410 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 SERPINB2P05120 415 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
VEGFB-204ENST00000543462 TRIM28Q13263 835 aaKnown RBP12.73□□□□□ -0.37
VEGFB-204ENST00000543462 TCIRG1Q13488 830 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
VEGFB-204ENST00000543462 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
VEGFB-204ENST00000543462 NLGN2Q8NFZ4 835 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 SYT17Q9BSW7 474 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 NIP7Q9Y221 180 aaKnown RBP eCLIP12.73□□□□□ -0.37
VEGFB-204ENST00000543462 COL4A1P02462 1669 aa12.73□□□□□ -0.37
VEGFB-204ENST00000543462 TAF1P21675 1872 aa12.72□□□□□ -0.37
VEGFB-204ENST00000543462 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
VEGFB-204ENST00000543462 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
VEGFB-204ENST00000543462 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
VEGFB-204ENST00000543462 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
VEGFB-204ENST00000543462 NLRP10Q86W26 655 aa12.72□□□□□ -0.37
VEGFB-204ENST00000543462 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
VEGFB-204ENST00000543462 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
VEGFB-204ENST00000543462 KLRG2A4D1S0 409 aaPredicted RBP12.71□□□□□ -0.37
VEGFB-204ENST00000543462 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
VEGFB-204ENST00000543462 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
VEGFB-204ENST00000543462 SUSD4Q5VX71 490 aa12.71□□□□□ -0.37
VEGFB-204ENST00000543462 BICDL1Q6ZP65 573 aa12.71□□□□□ -0.37
VEGFB-204ENST00000543462 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.37
VEGFB-204ENST00000543462 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.37
VEGFB-204ENST00000543462 FER1L6Q2WGJ9 1857 aa12.71□□□□□ -0.37
VEGFB-204ENST00000543462 A0A1B0GUL6 1792 aa12.71□□□□□ -0.38
VEGFB-204ENST00000543462 CHD4Q14839 1912 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 IGKV5-2P06315 115 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 KCNA3P22001 575 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 GPTP24298 496 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 CNBD1Q8NA66 436 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
VEGFB-204ENST00000543462 LTBP1Q14766 1721 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms