RNA–Protein interactions for RNA: ENST00000543087.5

TSG101-208, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-208ENST00000543087 TTLL6Q8N841 843 aa17.16■□□□□ 0.34
TSG101-208ENST00000543087 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
TSG101-208ENST00000543087 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
TSG101-208ENST00000543087 NUP98P52948 1817 aa17.15■□□□□ 0.34
TSG101-208ENST00000543087 PDE6BP35913 854 aa17.15■□□□□ 0.34
TSG101-208ENST00000543087 LMOD3Q0VAK6 560 aa17.15■□□□□ 0.34
TSG101-208ENST00000543087 CLEC4GQ6UXB4 293 aa17.15■□□□□ 0.34
TSG101-208ENST00000543087 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
TSG101-208ENST00000543087 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
TSG101-208ENST00000543087 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
TSG101-208ENST00000543087 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
TSG101-208ENST00000543087 ST5P78524 1137 aa17.14■□□□□ 0.33
TSG101-208ENST00000543087 HLFQ16534 295 aa17.14■□□□□ 0.33
TSG101-208ENST00000543087 NBPF5PQ86XG9 351 aaPredicted RBP17.14■□□□□ 0.33
TSG101-208ENST00000543087 NIP7Q9Y221 180 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSG101-208ENST00000543087 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
TSG101-208ENST00000543087 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
TSG101-208ENST00000543087 RASSF7Q02833 373 aa17.12■□□□□ 0.33
TSG101-208ENST00000543087 TTLL7Q6ZT98 887 aa17.12■□□□□ 0.33
TSG101-208ENST00000543087 RNF181Q9P0P0 153 aa17.12■□□□□ 0.33
TSG101-208ENST00000543087 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
TSG101-208ENST00000543087 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
TSG101-208ENST00000543087 SLX4Q8IY92 1834 aa17.1■□□□□ 0.33
TSG101-208ENST00000543087 TPTE2Q6XPS3 522 aa17.1■□□□□ 0.33
TSG101-208ENST00000543087 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
TSG101-208ENST00000543087 ZBTB3Q9H5J0 574 aa17.1■□□□□ 0.33
TSG101-208ENST00000543087 PDZRN3Q9UPQ7 1066 aa17.1■□□□□ 0.33
TSG101-208ENST00000543087 C21orf2O43822 256 aa17.09■□□□□ 0.33
TSG101-208ENST00000543087 ANXA1P04083 346 aa17.09■□□□□ 0.33
TSG101-208ENST00000543087 GTF2E1P29083 439 aaPredicted RBP17.09■□□□□ 0.33
TSG101-208ENST00000543087 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
TSG101-208ENST00000543087 MAP3K15Q6ZN16 1313 aa17.09■□□□□ 0.33
TSG101-208ENST00000543087 SRGNP10124 158 aa17.08■□□□□ 0.32
TSG101-208ENST00000543087 GPTP24298 496 aa17.08■□□□□ 0.32
TSG101-208ENST00000543087 KRT24Q2M2I5 525 aa17.08■□□□□ 0.32
TSG101-208ENST00000543087 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 CHL1O00533 1208 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 APAF1O14727 1248 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 KIF3CO14782 793 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 RGL2O15211 777 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 PRELPP51888 382 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 STYK1Q6J9G0 422 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 CNKSR1Q969H4 720 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
TSG101-208ENST00000543087 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
TSG101-208ENST00000543087 PDIA6Q15084 440 aa17.06■□□□□ 0.32
TSG101-208ENST00000543087 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
TSG101-208ENST00000543087 FER1L6Q2WGJ9 1857 aa17.05■□□□□ 0.32
TSG101-208ENST00000543087 ERBB4Q15303 1308 aa17.05■□□□□ 0.32
TSG101-208ENST00000543087 NFKBIEO00221 500 aa17.05■□□□□ 0.32
TSG101-208ENST00000543087 LMNB1P20700 586 aa17.05■□□□□ 0.32
TSG101-208ENST00000543087 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
TSG101-208ENST00000543087 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
TSG101-208ENST00000543087 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
TSG101-208ENST00000543087 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
TSG101-208ENST00000543087 NPR1P16066 1061 aa17.03■□□□□ 0.32
TSG101-208ENST00000543087 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
TSG101-208ENST00000543087 SUSD4Q5VX71 490 aa17.03■□□□□ 0.32
TSG101-208ENST00000543087 GIGYF2Q6Y7W6 1299 aaKnown RBP17.03■□□□□ 0.32
TSG101-208ENST00000543087 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
TSG101-208ENST00000543087 LRP10Q7Z4F1 713 aa17.03■□□□□ 0.32
TSG101-208ENST00000543087 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
TSG101-208ENST00000543087 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
TSG101-208ENST00000543087 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
TSG101-208ENST00000543087 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.32
TSG101-208ENST00000543087 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.32
TSG101-208ENST00000543087 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
TSG101-208ENST00000543087 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
TSG101-208ENST00000543087 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
TSG101-208ENST00000543087 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
TSG101-208ENST00000543087 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
TSG101-208ENST00000543087 TNRC6CQ9HCJ0 1690 aaKnown RBP17.01■□□□□ 0.31
TSG101-208ENST00000543087 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
TSG101-208ENST00000543087 OLFM4Q6UX06 510 aa17■□□□□ 0.31
TSG101-208ENST00000543087 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
TSG101-208ENST00000543087 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
TSG101-208ENST00000543087 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
TSG101-208ENST00000543087 CEP350Q5VT06 3117 aa17■□□□□ 0.31
TSG101-208ENST00000543087 ABCC12Q96J65 1359 aa17■□□□□ 0.31
TSG101-208ENST00000543087 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
TSG101-208ENST00000543087 TOMM70O94826 608 aa16.99■□□□□ 0.31
TSG101-208ENST00000543087 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
TSG101-208ENST00000543087 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
TSG101-208ENST00000543087 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
TSG101-208ENST00000543087 TAOK3Q9H2K8 898 aa16.99■□□□□ 0.31
TSG101-208ENST00000543087 ANKRD36CQ5JPF3 1778 aa16.98■□□□□ 0.31
TSG101-208ENST00000543087 ANP32CO43423 234 aa16.98■□□□□ 0.31
TSG101-208ENST00000543087 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
TSG101-208ENST00000543087 SOGA3Q5TF21 947 aa16.98■□□□□ 0.31
TSG101-208ENST00000543087 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
TSG101-208ENST00000543087 GLTPD2A6NH11 291 aa16.97■□□□□ 0.31
TSG101-208ENST00000543087 NTSR2O95665 410 aa16.97■□□□□ 0.31
TSG101-208ENST00000543087 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
TSG101-208ENST00000543087 HSPA6P17066 643 aa16.97■□□□□ 0.31
TSG101-208ENST00000543087 GNAI1P63096 354 aa16.97■□□□□ 0.31
TSG101-208ENST00000543087 PARP10Q53GL7 1025 aa16.97■□□□□ 0.31
TSG101-208ENST00000543087 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms