RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CELA2BP08218 269 aaPredicted RBP5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 ERVK-9P63128 1117 aa5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 FOXK2Q01167 660 aa5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 CC2D2BQ6DHV5 1058 aa5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 DYRK1BQ9Y463 629 aa5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 PCDHGA11Q9Y5H2 935 aa5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 A0A1W2PRU2 124 aa5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 H7C1W4 665 aa5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 SMARCA5O60264 1052 aaPredicted RBP5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 WEE1P30291 646 aa5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 FKBP5Q13451 457 aaPredicted RBP5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 GPAT2Q6NUI2 795 aa5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 BACH2Q9BYV9 841 aa5.93□□□□□ -1.46
SFSWAP-211ENST00000542813 SCAMP3O14828 347 aaKnown RBP5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 P4HBP07237 508 aaKnown RBP5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 USP4Q13107 963 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 MRPL58Q14197 206 aaKnown RBP5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 DBN1Q16643 649 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 SLC27A3Q5K4L6 730 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 XP32Q5T750 250 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 RIPOR1Q6ZS17 1223 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 CAPN12Q6ZSI9 719 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 CYP2U1Q7Z449 544 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 TSEN2Q8NCE0 465 aaKnown RBP5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 HELQQ8TDG4 1101 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 SPATA32Q96LK8 384 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 NLRP3Q96P20 1036 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 IGF1RP08069 1367 aa5.92□□□□□ -1.46
SFSWAP-211ENST00000542813 ABCC9O60706 1549 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 M0R2N6 131 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 GPR25O00155 361 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 HDLBPQ00341 1268 aaKnown RBP5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 POU4F2Q12837 409 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 CLN3Q13286 438 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 TMC7Q7Z402 723 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 TRERF1Q96PN7 1200 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 RBCK1Q9BYM8 510 aa5.91□□□□□ -1.46
SFSWAP-211ENST00000542813 SPATA31C2B4DYI2 1134 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 FAM13AO94988 1023 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 NAA30Q147X3 362 aaPredicted RBP5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 WDR44Q5JSH3 913 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 NBPF10Q6P3W6 841 aaKnown RBP5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 NBPF15Q8N660 670 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 COL26A1Q96A83 441 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 GAS2L1Q99501 681 aaPredicted RBP5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 GRIP2Q9C0E4 1043 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 PCDHB11Q9Y5F2 797 aa5.9□□□□□ -1.46
SFSWAP-211ENST00000542813 PHF20L1A8MW92 1017 aa5.89□□□□□ -1.47
SFSWAP-211ENST00000542813 NDUFB5O43674 189 aa5.89□□□□□ -1.47
SFSWAP-211ENST00000542813 BCRP11274 1271 aa5.89□□□□□ -1.47
SFSWAP-211ENST00000542813 SCTRP47872 440 aa5.89□□□□□ -1.47
SFSWAP-211ENST00000542813 GTPBP3Q969Y2 492 aaKnown RBP5.89□□□□□ -1.47
SFSWAP-211ENST00000542813 LRRC4BQ9NT99 713 aa5.89□□□□□ -1.47
SFSWAP-211ENST00000542813 PPM1GO15355 546 aaPredicted RBP5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 FOXO3O43524 673 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 NPR3P17342 541 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 XPCQ01831 940 aaPredicted RBP5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 FMR1Q06787 632 aaKnown RBP eCLIP5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 C9orf131Q5VYM1 1079 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 PODNQ7Z5L7 613 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 BEND7Q8N7W2 519 aaPredicted RBP5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 NEDD1Q8NHV4 660 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 PIK3R5Q8WYR1 880 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 OSBPL3Q9H4L5 887 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 ESF1Q9H501 851 aaKnown RBP5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 ARHGEF10LQ9HCE6 1279 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 TIMMDC1Q9NPL8 285 aa5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 NSFL1CQ9UNZ2 370 aaKnown RBP5.88□□□□□ -1.47
SFSWAP-211ENST00000542813 WASLO00401 505 aaPredicted RBP5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 TREHO43280 583 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 F11P03951 625 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 MX2P20592 715 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 IGFBP4P22692 258 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 MPSTP25325 297 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 ITGAEP38570 1179 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 FGD1P98174 961 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 GAS2L2Q8NHY3 880 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 TMC1Q8TDI8 760 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 ACDQ96AP0 544 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 NUCKS1Q9H1E3 243 aaKnown RBP5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 MRS2Q9HD23 443 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 BRPF3Q9ULD4 1205 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 CNTNAP5Q8WYK1 1306 aa5.87□□□□□ -1.47
SFSWAP-211ENST00000542813 MYCP01106 439 aaPredicted RBP5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 GNRH1P01148 92 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 RAD51AP2Q09MP3 1159 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 LDLRAD1Q5T700 205 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 TMEM87AQ8NBN3 555 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 DCAF5Q96JK2 942 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 FAM161BQ96MY7 647 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 ZNF358Q9NW07 568 aa5.86□□□□□ -1.47
SFSWAP-211ENST00000542813 PRPF40AO75400 957 aaKnown RBP5.85□□□□□ -1.47
SFSWAP-211ENST00000542813 LDHBP07195 334 aaKnown RBP5.85□□□□□ -1.47
SFSWAP-211ENST00000542813 MAPK8P45983 427 aa5.85□□□□□ -1.47
SFSWAP-211ENST00000542813 PLA2G4EQ3MJ16 856 aa5.85□□□□□ -1.47
SFSWAP-211ENST00000542813 NT5DC4Q86YG4 428 aa5.85□□□□□ -1.47
SFSWAP-211ENST00000542813 VTI1AQ96AJ9 217 aa5.85□□□□□ -1.47
SFSWAP-211ENST00000542813 CITED4Q96RK1 184 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms