RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 NUP98P52948 1817 aa16.7■□□□□ 0.26
CHFR-221ENST00000542714 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
CHFR-221ENST00000542714 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
CHFR-221ENST00000542714 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
CHFR-221ENST00000542714 IGKV5-2P06315 115 aa16.69■□□□□ 0.26
CHFR-221ENST00000542714 RXRBP28702 533 aa16.69■□□□□ 0.26
CHFR-221ENST00000542714 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
CHFR-221ENST00000542714 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
CHFR-221ENST00000542714 BCL11BQ9C0K0 894 aaPredicted RBP16.69■□□□□ 0.26
CHFR-221ENST00000542714 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
CHFR-221ENST00000542714 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
CHFR-221ENST00000542714 GNAI3P08754 354 aa16.68■□□□□ 0.26
CHFR-221ENST00000542714 CRKLP46109 303 aaKnown RBP16.68■□□□□ 0.26
CHFR-221ENST00000542714 CEP85Q6P2H3 762 aa16.68■□□□□ 0.26
CHFR-221ENST00000542714 FAM196AQ6ZSG2 479 aa16.68■□□□□ 0.26
CHFR-221ENST00000542714 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
CHFR-221ENST00000542714 MYD88Q99836 296 aa16.68■□□□□ 0.26
CHFR-221ENST00000542714 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
CHFR-221ENST00000542714 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
CHFR-221ENST00000542714 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
CHFR-221ENST00000542714 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
CHFR-221ENST00000542714 NEURL1BA8MQ27 555 aa16.66■□□□□ 0.26
CHFR-221ENST00000542714 GNAI2P04899 355 aa16.66■□□□□ 0.26
CHFR-221ENST00000542714 C4BP0C0L5 1744 aa16.66■□□□□ 0.26
CHFR-221ENST00000542714 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
CHFR-221ENST00000542714 KCNQ4P56696 695 aa16.66■□□□□ 0.26
CHFR-221ENST00000542714 UTYO14607 1347 aa16.66■□□□□ 0.26
CHFR-221ENST00000542714 NBPF7P0C2Y1 421 aaPredicted RBP16.65■□□□□ 0.26
CHFR-221ENST00000542714 UBTFL1P0CB47 393 aaPredicted RBP16.65■□□□□ 0.26
CHFR-221ENST00000542714 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
CHFR-221ENST00000542714 SMC5Q8IY18 1101 aa16.65■□□□□ 0.26
CHFR-221ENST00000542714 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
CHFR-221ENST00000542714 LRRFIP2Q9Y608 721 aaKnown RBP16.65■□□□□ 0.26
CHFR-221ENST00000542714 NEXNQ0ZGT2 675 aa16.64■□□□□ 0.25
CHFR-221ENST00000542714 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
CHFR-221ENST00000542714 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
CHFR-221ENST00000542714 SCN7AQ01118 1682 aa16.64■□□□□ 0.25
CHFR-221ENST00000542714 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
CHFR-221ENST00000542714 CNTNAP4Q9C0A0 1308 aa16.64■□□□□ 0.25
CHFR-221ENST00000542714 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
CHFR-221ENST00000542714 GRM8O00222 908 aa16.63■□□□□ 0.25
CHFR-221ENST00000542714 TRIM37O94972 964 aa16.63■□□□□ 0.25
CHFR-221ENST00000542714 GCKRQ14397 625 aa16.63■□□□□ 0.25
CHFR-221ENST00000542714 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
CHFR-221ENST00000542714 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
CHFR-221ENST00000542714 ISCA1Q9BUE6 129 aa16.62■□□□□ 0.25
CHFR-221ENST00000542714 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
CHFR-221ENST00000542714 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
CHFR-221ENST00000542714 UBR3Q6ZT12 1888 aa16.62■□□□□ 0.25
CHFR-221ENST00000542714 HLFQ16534 295 aa16.61■□□□□ 0.25
CHFR-221ENST00000542714 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
CHFR-221ENST00000542714 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
CHFR-221ENST00000542714 COL15A1P39059 1388 aa16.61■□□□□ 0.25
CHFR-221ENST00000542714 RGPD3A6NKT7 1758 aaPredicted RBP16.61■□□□□ 0.25
CHFR-221ENST00000542714 RGPD4Q7Z3J3 1758 aa16.61■□□□□ 0.25
CHFR-221ENST00000542714 CASP7P55210 303 aa16.6■□□□□ 0.25
CHFR-221ENST00000542714 ATP8B2P98198 1209 aa16.6■□□□□ 0.25
CHFR-221ENST00000542714 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
CHFR-221ENST00000542714 RC3H1Q5TC82 1133 aaKnown RBP16.6■□□□□ 0.25
CHFR-221ENST00000542714 DZIP3Q86Y13 1208 aaKnown RBP16.6■□□□□ 0.25
CHFR-221ENST00000542714 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
CHFR-221ENST00000542714 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
CHFR-221ENST00000542714 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
CHFR-221ENST00000542714 GIGYF2Q6Y7W6 1299 aaKnown RBP16.59■□□□□ 0.25
CHFR-221ENST00000542714 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
CHFR-221ENST00000542714 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
CHFR-221ENST00000542714 TBC1D2BQ9UPU7 963 aa16.59■□□□□ 0.25
CHFR-221ENST00000542714 CAMTA2O94983 1202 aa16.58■□□□□ 0.24
CHFR-221ENST00000542714 POLA2Q14181 598 aa16.58■□□□□ 0.24
CHFR-221ENST00000542714 JARID2Q92833 1246 aaPredicted RBP16.58■□□□□ 0.24
CHFR-221ENST00000542714 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
CHFR-221ENST00000542714 CWC25Q9NXE8 425 aaPredicted RBP16.58■□□□□ 0.24
CHFR-221ENST00000542714 H7C1W4 665 aa16.57■□□□□ 0.24
CHFR-221ENST00000542714 NUCB1Q02818 461 aa16.57■□□□□ 0.24
CHFR-221ENST00000542714 TRIM28Q13263 835 aaKnown RBP16.57■□□□□ 0.24
CHFR-221ENST00000542714 MTX1Q13505 466 aa16.57■□□□□ 0.24
CHFR-221ENST00000542714 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
CHFR-221ENST00000542714 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
CHFR-221ENST00000542714 SSH3Q8TE77 659 aa16.57■□□□□ 0.24
CHFR-221ENST00000542714 TUBGCP6Q96RT7 1819 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 A0A087WZG4 1122 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 HMMRO75330 724 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 PDE4AP27815 886 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 ARXQ96QS3 562 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
CHFR-221ENST00000542714 MYH3P11055 1940 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 LAMB2P55268 1798 aa16.56■□□□□ 0.24
CHFR-221ENST00000542714 HSP90AB3PQ58FF7 597 aa16.55■□□□□ 0.24
CHFR-221ENST00000542714 ZNF34Q8IZ26 560 aa16.55■□□□□ 0.24
CHFR-221ENST00000542714 COL24A1Q17RW2 1714 aa16.55■□□□□ 0.24
CHFR-221ENST00000542714 CASZ1Q86V15 1759 aa16.54■□□□□ 0.24
CHFR-221ENST00000542714 DDX60Q8IY21 1712 aaKnown RBP16.54■□□□□ 0.24
CHFR-221ENST00000542714 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
CHFR-221ENST00000542714 GNPATO15228 680 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1851.6 ms