RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 IFT172Q9UG01 1749 aa11.75□□□□□ -0.53
CLPB-211ENST00000542555 KCNQ2O43526 872 aa11.75□□□□□ -0.53
CLPB-211ENST00000542555 BMP1P13497 986 aa11.75□□□□□ -0.53
CLPB-211ENST00000542555 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
CLPB-211ENST00000542555 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
CLPB-211ENST00000542555 ZSCAN1Q8NBB4 408 aa11.75□□□□□ -0.53
CLPB-211ENST00000542555 GMPRP36959 345 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 SPATA31A1Q5TZJ5 1347 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
CLPB-211ENST00000542555 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 ABCA3Q99758 1704 aa11.74□□□□□ -0.53
CLPB-211ENST00000542555 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
CLPB-211ENST00000542555 NRAPQ86VF7 1730 aa11.73□□□□□ -0.53
CLPB-211ENST00000542555 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
CLPB-211ENST00000542555 GUCA2AQ02747 115 aa11.72□□□□□ -0.53
CLPB-211ENST00000542555 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.53
CLPB-211ENST00000542555 SIAH2O43255 324 aa11.71□□□□□ -0.53
CLPB-211ENST00000542555 CHRNA2Q15822 529 aa11.71□□□□□ -0.53
CLPB-211ENST00000542555 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
CLPB-211ENST00000542555 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
CLPB-211ENST00000542555 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.53
CLPB-211ENST00000542555 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.53
CLPB-211ENST00000542555 KIAA0232Q92628 1395 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 MINK1Q8N4C8 1332 aaPredicted RBP11.7□□□□□ -0.54
CLPB-211ENST00000542555 TNS1Q9HBL0 1735 aaKnown RBP11.7□□□□□ -0.54
CLPB-211ENST00000542555 IRF6O14896 467 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 VEGFBP49765 207 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
CLPB-211ENST00000542555 BARGINQ6ZT62 677 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 TRIM46Q7Z4K8 759 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 RETREG3Q86VR2 466 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 TRAK1Q9UPV9 953 aa11.7□□□□□ -0.54
CLPB-211ENST00000542555 THSD7AQ9UPZ6 1657 aa11.69□□□□□ -0.54
CLPB-211ENST00000542555 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
CLPB-211ENST00000542555 TCP11L2Q8N4U5 519 aa11.69□□□□□ -0.54
CLPB-211ENST00000542555 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
CLPB-211ENST00000542555 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
CLPB-211ENST00000542555 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
CLPB-211ENST00000542555 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
CLPB-211ENST00000542555 KRI1Q8N9T8 703 aaKnown RBP11.68□□□□□ -0.54
CLPB-211ENST00000542555 DLC1Q96QB1 1528 aa11.67□□□□□ -0.54
CLPB-211ENST00000542555 H3BM21 787 aa11.66□□□□□ -0.54
CLPB-211ENST00000542555 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
CLPB-211ENST00000542555 TRPM3Q9HCF6 1732 aaPredicted RBP11.66□□□□□ -0.54
CLPB-211ENST00000542555 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 ALS2Q96Q42 1657 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 MS4A1P11836 297 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 CLCN1P35523 988 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 SH3BP2P78314 561 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
CLPB-211ENST00000542555 ATP7BP35670 1465 aa11.64□□□□□ -0.55
CLPB-211ENST00000542555 PLSCR1O15162 318 aa11.64□□□□□ -0.55
CLPB-211ENST00000542555 LARP1Q6PKG0 1096 aaKnown RBP11.64□□□□□ -0.55
CLPB-211ENST00000542555 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
CLPB-211ENST00000542555 ZNF784Q8NCA9 323 aaPredicted RBP11.64□□□□□ -0.55
CLPB-211ENST00000542555 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
CLPB-211ENST00000542555 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
CLPB-211ENST00000542555 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 RREB1Q92766 1687 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 ZBTB7CA1YPR0 619 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 NLRP13Q86W25 1043 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 NUP188Q5SRE5 1749 aa11.63□□□□□ -0.55
CLPB-211ENST00000542555 OVOS2A0A0G2JMS6 1433 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 OVOS2A0A0J9YW53 1432 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 OVOS2Q6IE36 1432 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 FDX1P10109 184 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 SCARF1Q14162 830 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 DDB1Q16531 1140 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 KDM2AQ9Y2K7 1162 aa11.62□□□□□ -0.55
CLPB-211ENST00000542555 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
CLPB-211ENST00000542555 C1QTNF8P60827 252 aa11.61□□□□□ -0.55
CLPB-211ENST00000542555 FAM217BQ9NTX9 383 aaPredicted RBP11.61□□□□□ -0.55
CLPB-211ENST00000542555 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
CLPB-211ENST00000542555 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
CLPB-211ENST00000542555 LINC01559Q495D7 138 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 TOM1L2Q6ZVM7 507 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 DCAF11Q8TEB1 546 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 TLL2Q9Y6L7 1015 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 ACEP12821 1306 aa11.59□□□□□ -0.55
CLPB-211ENST00000542555 CPDO75976 1380 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
CLPB-211ENST00000542555 GCP02774 474 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 LORP23490 312 aaPredicted RBP11.58□□□□□ -0.56
CLPB-211ENST00000542555 PTPRNQ16849 979 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 BAP1Q92560 729 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 SYT17Q9BSW7 474 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 CDCA7Q9BWT1 371 aaPredicted RBP11.58□□□□□ -0.56
CLPB-211ENST00000542555 CDK19Q9BWU1 502 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 CRB1P82279 1406 aa11.58□□□□□ -0.56
CLPB-211ENST00000542555 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms