RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
NPIPB4-215ENST00000542133 DDNO94850 711 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 ITGBL1O95965 494 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 MAP2K1Q02750 393 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 NFIXQ14938 502 aa10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 TAF7LQ5H9L4 462 aa10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 USPL1Q5W0Q7 1092 aa10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 C2CD5Q86YS7 1000 aa10.66□□□□□ -0.7
NPIPB4-215ENST00000542133 LTBP3Q9NS15 1303 aa10.65□□□□□ -0.7
NPIPB4-215ENST00000542133 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
NPIPB4-215ENST00000542133 PTCD1O75127 700 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-215ENST00000542133 INTS5Q6P9B9 1019 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-215ENST00000542133 SOS1Q07889 1333 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 WASHC2AQ641Q2 1341 aa10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 WDR33Q9C0J8 1336 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 H0YIN7 160 aa10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 ZPR1O75312 459 aa10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 HSP90AB1P08238 724 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 TAF1DQ9H5J8 278 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
NPIPB4-215ENST00000542133 PPM1GO15355 546 aaPredicted RBP10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 C21orf2O43822 256 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 SERPINB2P05120 415 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 CABP4P57796 275 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 NEUROD1Q13562 356 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 DEFB115Q30KQ5 88 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 TAOK3Q9H2K8 898 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 CACNA1SQ13698 1873 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 COL15A1P39059 1388 aa10.63□□□□□ -0.71
NPIPB4-215ENST00000542133 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
NPIPB4-215ENST00000542133 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
NPIPB4-215ENST00000542133 BCL2L12Q9HB09 334 aa10.62□□□□□ -0.71
NPIPB4-215ENST00000542133 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
NPIPB4-215ENST00000542133 SCN7AQ01118 1682 aa10.62□□□□□ -0.71
NPIPB4-215ENST00000542133 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
NPIPB4-215ENST00000542133 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
NPIPB4-215ENST00000542133 SCN11AQ9UI33 1791 aa10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 EIF4A2Q14240 407 aaKnown RBP10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 ZNF530Q6P9A1 599 aaPredicted RBP10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 DNAJC10Q8IXB1 793 aa10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 ZNF622Q969S3 477 aaKnown RBP eCLIP10.6□□□□□ -0.712e-17■■■■□ 20.6
NPIPB4-215ENST00000542133 MCOLN1Q9GZU1 580 aa10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 ABT1Q9ULW3 272 aaKnown RBP10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
NPIPB4-215ENST00000542133 ZNF541Q9H0D2 1346 aa10.59□□□□□ -0.71
NPIPB4-215ENST00000542133 MAP1SQ66K74 1059 aaPredicted RBP10.59□□□□□ -0.71
NPIPB4-215ENST00000542133 BEGAINQ9BUH8 593 aa10.59□□□□□ -0.71
NPIPB4-215ENST00000542133 HACL1Q9UJ83 578 aa10.59□□□□□ -0.71
NPIPB4-215ENST00000542133 TSKSQ9UJT2 592 aa10.59□□□□□ -0.71
NPIPB4-215ENST00000542133 MRC1P22897 1456 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 EPHX2P34913 555 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 NFATC2IPQ8NCF5 419 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 CAPNS2Q96L46 248 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 ZBTB1Q9Y2K1 713 aa10.58□□□□□ -0.72
NPIPB4-215ENST00000542133 CYP19A1P11511 503 aaPredicted RBP10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 PDE6BP35913 854 aa10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 MTHFSP49914 203 aa10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 BRIP1Q9BX63 1249 aa10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 DDX21Q9NR30 783 aaKnown RBP eCLIP10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 POLKQ9UBT6 870 aa10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 RNF123Q5XPI4 1314 aa10.57□□□□□ -0.72
NPIPB4-215ENST00000542133 ECE1P42892 770 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 AMOTQ4VCS5 1084 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 SOGA3Q5TF21 947 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 LHX8Q68G74 356 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 PRR5LQ6MZQ0 368 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 CYP4F22Q6NT55 531 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 PRPF40BQ6NWY9 871 aaKnown RBP10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 BICDL1Q6ZP65 573 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 PAXIP1Q6ZW49 1069 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 PNMA8AQ86V59 439 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 MIER1Q8N108 512 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 GPR101Q96P66 508 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 CASP8AP2Q9UKL3 1982 aa10.56□□□□□ -0.72
NPIPB4-215ENST00000542133 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 UBR2Q8IWV8 1755 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 GRM1Q13255 1194 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 C1orf141Q5JVX7 400 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 CCDC24Q8N4L8 307 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 CNKSR1Q969H4 720 aa10.55□□□□□ -0.72
NPIPB4-215ENST00000542133 GALR2O43603 387 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-215ENST00000542133 DGKZQ13574 1117 aa10.54□□□□□ -0.72
NPIPB4-215ENST00000542133 TBC1D9BQ66K14 1250 aa10.54□□□□□ -0.72
NPIPB4-215ENST00000542133 STYK1Q6J9G0 422 aa10.54□□□□□ -0.72
NPIPB4-215ENST00000542133 CA12O43570 354 aa10.53□□□□□ -0.72
NPIPB4-215ENST00000542133 AOC2O75106 756 aa10.53□□□□□ -0.72
NPIPB4-215ENST00000542133 SRGNP10124 158 aa10.53□□□□□ -0.72
NPIPB4-215ENST00000542133 FMR1Q06787 632 aaKnown RBP eCLIP10.53□□□□□ -0.72
NPIPB4-215ENST00000542133 CCDC93Q567U6 631 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms