RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 SENP3-EIF4A1A0A087X0R7 540 aa10.16□□□□□ -0.78
NECAP1-205ENST00000541948 PDIA6Q15084 440 aa10.16□□□□□ -0.78
NECAP1-205ENST00000541948 PROSER3Q2NL68 480 aa10.16□□□□□ -0.78
NECAP1-205ENST00000541948 TTLL7Q6ZT98 887 aa10.16□□□□□ -0.78
NECAP1-205ENST00000541948 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-205ENST00000541948 SLX4Q8IY92 1834 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 A0A087WZG4 1122 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 CAPN15O75808 1086 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 ANXA1P04083 346 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 NEUROD2Q15784 382 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 RUNDC1Q96C34 613 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 GPBP1L1Q9HC44 474 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-205ENST00000541948 ARFGEF2Q9Y6D5 1785 aa10.15□□□□□ -0.78
NECAP1-205ENST00000541948 SLC51AQ86UW1 340 aa10.14□□□□□ -0.79
NECAP1-205ENST00000541948 PIM2Q9P1W9 311 aa10.14□□□□□ -0.79
NECAP1-205ENST00000541948 CCDC88AQ3V6T2 1871 aa10.14□□□□□ -0.79
NECAP1-205ENST00000541948 FER1L6Q2WGJ9 1857 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 CHL1O00533 1208 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 RASSF7Q02833 373 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 ARHGAP27Q6ZUM4 889 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 C2CD5Q86YS7 1000 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 NGEFQ8N5V2 710 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 PNISRQ8TF01 805 aaKnown RBP10.13□□□□□ -0.79
NECAP1-205ENST00000541948 ZNF526Q8TF50 670 aaPredicted RBP10.13□□□□□ -0.79
NECAP1-205ENST00000541948 TSPYL4Q9UJ04 414 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 ABCC12Q96J65 1359 aa10.13□□□□□ -0.79
NECAP1-205ENST00000541948 UBN2Q6ZU65 1347 aa10.12□□□□□ -0.79
NECAP1-205ENST00000541948 ANKRD36CQ5JPF3 1778 aa10.12□□□□□ -0.79
NECAP1-205ENST00000541948 APAF1O14727 1248 aa10.12□□□□□ -0.79
NECAP1-205ENST00000541948 MYL6BP14649 208 aa10.12□□□□□ -0.79
NECAP1-205ENST00000541948 DALRD3Q5D0E6 543 aaKnown RBP10.12□□□□□ -0.79
NECAP1-205ENST00000541948 PNNQ9H307 717 aaKnown RBP10.12□□□□□ -0.79
NECAP1-205ENST00000541948 PDZRN3Q9UPQ7 1066 aa10.12□□□□□ -0.79
NECAP1-205ENST00000541948 TIAM2Q8IVF5 1701 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-205ENST00000541948 NFKBIEO00221 500 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 KIF3CO14782 793 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 NEFMP07197 916 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 ZNF853P0CG23 659 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 ZEB1P37275 1124 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-205ENST00000541948 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
NECAP1-205ENST00000541948 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 SETDB2Q96T68 719 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 BRIP1Q9BX63 1249 aa10.11□□□□□ -0.79
NECAP1-205ENST00000541948 U3KPZ7 1027 aaPredicted RBP10.11□□□□□ -0.79
NECAP1-205ENST00000541948 MAP3K15Q6ZN16 1313 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 ZC3H4Q9UPT8 1303 aaKnown RBP10.1□□□□□ -0.79
NECAP1-205ENST00000541948 SNED1Q8TER0 1413 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 COL4A1P02462 1669 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 SRGNP10124 158 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 EIF2S2P20042 333 aaKnown RBP10.1□□□□□ -0.79
NECAP1-205ENST00000541948 C9orf131Q5VYM1 1079 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 CLEC4GQ6UXB4 293 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 C3orf67Q6ZVT6 689 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 ZBTB3Q9H5J0 574 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 NIP7Q9Y221 180 aaKnown RBP eCLIP10.1□□□□□ -0.79
NECAP1-205ENST00000541948 LAMB2P55268 1798 aa10.1□□□□□ -0.79
NECAP1-205ENST00000541948 KLRG2A4D1S0 409 aaPredicted RBP10.09□□□□□ -0.79
NECAP1-205ENST00000541948 H0YIN7 160 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 RGL2O15211 777 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 SUSD4Q5VX71 490 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 OLFM4Q6UX06 510 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 NUTM1Q86Y26 1132 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 ZNF34Q8IZ26 560 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 CNBD1Q8NA66 436 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 BABAM1Q9NWV8 329 aa10.09□□□□□ -0.79
NECAP1-205ENST00000541948 DICER1Q9UPY3 1922 aaKnown RBP10.08□□□□□ -0.8
NECAP1-205ENST00000541948 ERVV-1B6SEH8 477 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 GPTP24298 496 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 ERFEQ4G0M1 354 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 NBPF5PQ86XG9 351 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-205ENST00000541948 TTLL6Q8N841 843 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 NMRK2Q9NPI5 230 aa10.08□□□□□ -0.8
NECAP1-205ENST00000541948 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
NECAP1-205ENST00000541948 LAS1LQ9Y4W2 734 aaKnown RBP10.08□□□□□ -0.8
NECAP1-205ENST00000541948 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 TAF1P21675 1872 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 COL4A5P29400 1685 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 C21orf2O43822 256 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 NTSR2O95665 410 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 HSPA6P17066 643 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 PDE6BP35913 854 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
NECAP1-205ENST00000541948 SYNE4Q8N205 404 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.8
NECAP1-205ENST00000541948 CFAP44Q96MT7 982 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 CHPF2Q9P2E5 772 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
NECAP1-205ENST00000541948 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
NECAP1-205ENST00000541948 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
NECAP1-205ENST00000541948 TOMM70O94826 608 aa10.06□□□□□ -0.8
NECAP1-205ENST00000541948 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
NECAP1-205ENST00000541948 PRPF40BQ6NWY9 871 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms