RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 NOP2P46087 812 aaKnown RBP12.36□□□□□ -0.43
GABRB3-204ENST00000541819 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
GABRB3-204ENST00000541819 BAG3O95817 575 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-204ENST00000541819 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 STX6O43752 255 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 PDE4BQ07343 736 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 TTC16Q8NEE8 873 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 USP37Q86T82 979 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
GABRB3-204ENST00000541819 WIZO95785 1651 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 DUSP27Q5VZP5 1158 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 EXOC6BQ9Y2D4 811 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 IDEP14735 1019 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
GABRB3-204ENST00000541819 TRMT1LQ7Z2T5 733 aaKnown RBP12.35□□□□□ -0.43
GABRB3-204ENST00000541819 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-204ENST00000541819 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 ZWINTO95229 277 aa12.35□□□□□ -0.43
GABRB3-204ENST00000541819 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-204ENST00000541819 ERMNQ8TAM6 284 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 RPGRIP1LQ68CZ1 1315 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 NDC80O14777 642 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 GSTO1P78417 241 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 CDC5LQ99459 802 aaKnown RBP12.34□□□□□ -0.43
GABRB3-204ENST00000541819 NEMFO60524 1076 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 IQCGQ9H095 443 aaKnown RBP12.34□□□□□ -0.43
GABRB3-204ENST00000541819 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
GABRB3-204ENST00000541819 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.43
GABRB3-204ENST00000541819 KANK3Q6NY19 840 aa12.33□□□□□ -0.43
GABRB3-204ENST00000541819 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.43
GABRB3-204ENST00000541819 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.43
GABRB3-204ENST00000541819 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
GABRB3-204ENST00000541819 GSDMDP57764 484 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
GABRB3-204ENST00000541819 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 ERBINQ96RT1 1412 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 GOLGA6L9A6NEM1 432 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 ST5P78524 1137 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 MCM4P33991 863 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.44
GABRB3-204ENST00000541819 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 SERPINA10Q9UK55 444 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 FSIP1Q8NA03 581 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
GABRB3-204ENST00000541819 GOLIM4O00461 696 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 TRAF1Q13077 416 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 PHACTR2O75167 634 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 STX1AQ16623 288 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 TMEM67Q5HYA8 995 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 FBF1Q8TES7 1133 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 UBA7P41226 1012 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 MXRA7P84157 204 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-204ENST00000541819 TMEM57Q8N5G2 664 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
GABRB3-204ENST00000541819 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
GABRB3-204ENST00000541819 ADAMTS2O95450 1211 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 NCOA2Q15596 1464 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 HSF2BPO75031 334 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 RASAL2Q9UJF2 1139 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 KRT13P13646 458 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 ZSCAN30Q86W11 494 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 NSRP1Q9H0G5 558 aaKnown RBP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 ESPNB1AK53 854 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 TMC6Q7Z403 805 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 NUDT16Q96DE0 195 aaKnown RBP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 TIGD1Q96MW7 591 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 JADE2Q9NQC1 790 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
GABRB3-204ENST00000541819 V9GYY5 206 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-204ENST00000541819 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-204ENST00000541819 MFSD6Q6ZSS7 791 aa12.3□□□□□ -0.44
GABRB3-204ENST00000541819 TEX13AQ9BXU3 409 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms