RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 KIF20BQ96Q89 1820 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 CPSF1Q10570 1443 aaKnown RBP8.55□□□□□ -1.04
EPHA4-214ENST00000541600 PPIP5K1Q6PFW1 1433 aa8.55□□□□□ -1.04
EPHA4-214ENST00000541600 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-214ENST00000541600 HDGFP51858 240 aaKnown RBP8.55□□□□□ -1.04
EPHA4-214ENST00000541600 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
EPHA4-214ENST00000541600 KRT27Q7Z3Y8 459 aa8.55□□□□□ -1.04
EPHA4-214ENST00000541600 PRAM1Q96QH2 718 aa8.55□□□□□ -1.04
EPHA4-214ENST00000541600 AATKQ6ZMQ8 1374 aa8.55□□□□□ -1.04
EPHA4-214ENST00000541600 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 CARNS1A5YM72 827 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 TMPOP42166 694 aaKnown RBP8.54□□□□□ -1.04
EPHA4-214ENST00000541600 BAG6P46379 1132 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 USP46P62068 366 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 VAC14Q08AM6 782 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 CDK19Q9BWU1 502 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 POGKQ9P215 609 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 COL22A1Q8NFW1 1626 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-214ENST00000541600 DCCP43146 1447 aa8.54□□□□□ -1.04
EPHA4-214ENST00000541600 C1orf167Q5SNV9 1468 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 C3orf80F5H4A9 247 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 IGHDP01880 384 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 U2AF1L5P0DN76 240 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-214ENST00000541600 COL9A1P20849 921 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 U2AF1Q01081 240 aaKnown RBP eCLIP8.53□□□□□ -1.04
EPHA4-214ENST00000541600 CTDSPL2Q05D32 466 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 ALDH1L2Q3SY69 923 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 PDGFDQ9GZP0 370 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-214ENST00000541600 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.53□□□□□ -1.04
EPHA4-214ENST00000541600 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 NRXN3Q9Y4C0 1643 aa8.53□□□□□ -1.04
EPHA4-214ENST00000541600 EDC4Q6P2E9 1401 aaKnown RBP8.53□□□□□ -1.04
EPHA4-214ENST00000541600 PCNTO95613 3336 aa8.52□□□□□ -1.04
EPHA4-214ENST00000541600 NBPF26B4DH59 902 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 HOXA2O43364 376 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 DIAPH1O60610 1272 aaKnown RBP8.52□□□□□ -1.05
EPHA4-214ENST00000541600 ATG7O95352 703 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 FDX1P10109 184 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 LMOD1P29536 600 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-214ENST00000541600 ZKSCAN2Q63HK3 967 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.05
EPHA4-214ENST00000541600 RDH13Q8NBN7 331 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 RWDD1Q9H446 243 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-214ENST00000541600 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
EPHA4-214ENST00000541600 TMEM88BA6NKF7 163 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 IGSF3O75054 1194 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 NUDT7P0C024 238 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 GCGRP47871 477 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 HDAC1Q13547 482 aaPredicted RBP8.51□□□□□ -1.05
EPHA4-214ENST00000541600 MVPQ14764 893 aaKnown RBP8.51□□□□□ -1.05
EPHA4-214ENST00000541600 TATDN2Q93075 761 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 UCN2Q96RP3 112 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 TFIP11Q9UBB9 837 aaKnown RBP8.51□□□□□ -1.05
EPHA4-214ENST00000541600 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 DISP2A7MBM2 1401 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 MON2Q7Z3U7 1717 aa8.51□□□□□ -1.05
EPHA4-214ENST00000541600 WASLO00401 505 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-214ENST00000541600 SOX11P35716 441 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 CALD1Q05682 793 aaKnown RBP8.5□□□□□ -1.05
EPHA4-214ENST00000541600 PANK1Q8TE04 598 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 ARHGAP45Q92619 1136 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 GGNBP2Q9H3C7 697 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 STK26Q9P289 416 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 POLKQ9UBT6 870 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 PNMA3Q9UL41 463 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 AKAP12Q02952 1782 aa8.5□□□□□ -1.05
EPHA4-214ENST00000541600 MAP2P11137 1827 aaKnown RBP8.5□□□□□ -1.05
EPHA4-214ENST00000541600 PIK3R4Q99570 1358 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 PPP1R3GB7ZBB8 358 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 IPO8O15397 1037 aaKnown RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 KCNQ2O43526 872 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 GABBR2O75899 941 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 RLBP1P12271 317 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 TNNT2P45379 298 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 XPCQ01831 940 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 VPS72Q15906 364 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 BCL2L12Q9HB09 334 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 RRP7AQ9Y3A4 280 aaKnown RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 USP19O94966 1318 aa8.49□□□□□ -1.05
EPHA4-214ENST00000541600 TNS1Q9HBL0 1735 aaKnown RBP8.49□□□□□ -1.05
EPHA4-214ENST00000541600 METP08581 1390 aa8.48□□□□□ -1.05
EPHA4-214ENST00000541600 CANXP27824 592 aaKnown RBP8.48□□□□□ -1.05
EPHA4-214ENST00000541600 DEKP35659 375 aaKnown RBP8.48□□□□□ -1.05
EPHA4-214ENST00000541600 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
EPHA4-214ENST00000541600 SP7Q8TDD2 431 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-214ENST00000541600 LRRN4Q8WUT4 740 aa8.48□□□□□ -1.05
EPHA4-214ENST00000541600 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
EPHA4-214ENST00000541600 DDX19BQ9UMR2 479 aa8.48□□□□□ -1.05
EPHA4-214ENST00000541600 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
EPHA4-214ENST00000541600 KIF16BQ96L93 1317 aa8.48□□□□□ -1.05
EPHA4-214ENST00000541600 PXDNQ92626 1479 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms