RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 RNPC3Q96LT9 517 aaKnown RBP7.28□□□□□ -1.24
DDB1-219ENST00000541513 RPS6KC1Q96S38 1066 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 RNF19AQ9NV58 838 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 BSDC1Q9NW68 430 aaPredicted RBP7.28□□□□□ -1.24
DDB1-219ENST00000541513 FKBPLQ9UIM3 349 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
DDB1-219ENST00000541513 FMN1Q68DA7 1419 aa7.27□□□□□ -1.24
DDB1-219ENST00000541513 UACAQ9BZF9 1416 aa7.27□□□□□ -1.24
DDB1-219ENST00000541513 KDM4FA0A1W2PPD8 638 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 ATF4P18848 351 aaPredicted RBP7.27□□□□□ -1.25
DDB1-219ENST00000541513 WEE1P30291 646 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 PBX2P40425 430 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 ATP2B2Q01814 1243 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 FOXD4L6Q3SYB3 417 aaPredicted RBP7.27□□□□□ -1.25
DDB1-219ENST00000541513 FOXD4L3Q6VB84 417 aaPredicted RBP7.27□□□□□ -1.25
DDB1-219ENST00000541513 JDP2Q8WYK2 163 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 ZDHHC16Q969W1 377 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.27□□□□□ -1.256e-14■□□□□ 9.9
DDB1-219ENST00000541513 SRA1Q9HD15 236 aaKnown RBP7.27□□□□□ -1.25
DDB1-219ENST00000541513 PCDHGA4Q9Y5G9 962 aa7.27□□□□□ -1.25
DDB1-219ENST00000541513 NUDT7P0C024 238 aa7.26□□□□□ -1.25
DDB1-219ENST00000541513 MAPK8P45983 427 aa7.26□□□□□ -1.25
DDB1-219ENST00000541513 ZNF394Q53GI3 561 aa7.26□□□□□ -1.25
DDB1-219ENST00000541513 GPATCH11Q8N954 259 aa7.26□□□□□ -1.25
DDB1-219ENST00000541513 FAM129BQ96TA1 746 aa7.26□□□□□ -1.25
DDB1-219ENST00000541513 QTRT2Q9H974 415 aaKnown RBP7.26□□□□□ -1.25
DDB1-219ENST00000541513 KDM5BQ9UGL1 1544 aa7.26□□□□□ -1.25
DDB1-219ENST00000541513 PLB1Q6P1J6 1458 aa7.25□□□□□ -1.25
DDB1-219ENST00000541513 RGS20O76081 388 aa7.25□□□□□ -1.25
DDB1-219ENST00000541513 FKBP5Q13451 457 aaPredicted RBP7.25□□□□□ -1.25
DDB1-219ENST00000541513 USP48Q86UV5 1035 aa7.25□□□□□ -1.25
DDB1-219ENST00000541513 GNL3LQ9NVN8 582 aaKnown RBP7.25□□□□□ -1.25
DDB1-219ENST00000541513 ZCCHC11Q5TAX3 1644 aaKnown RBP7.24□□□□□ -1.25
DDB1-219ENST00000541513 HECW1Q76N89 1606 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 MAPKBP1O60336 1514 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 GNA15P30679 374 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 UBE4AQ14139 1066 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 ARSHQ5FYA8 562 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 ODR4Q5SWX8 454 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 ALG1LQ6GMV1 187 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 ADGRD1Q6QNK2 874 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 NUDT18Q6ZVK8 323 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 SCYL1Q96KG9 808 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 SENP7Q9BQF6 1050 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 MKNK1Q9BUB5 465 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 SLKQ9H2G2 1235 aaPredicted RBP7.24□□□□□ -1.25
DDB1-219ENST00000541513 PRDM10Q9NQV6 1147 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 SIRPGQ9P1W8 387 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 TTF2Q9UNY4 1162 aaKnown RBP7.24□□□□□ -1.25
DDB1-219ENST00000541513 LHX6Q9UPM6 363 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 RBM19Q9Y4C8 960 aaKnown RBP7.24□□□□□ -1.25
DDB1-219ENST00000541513 GPSM3Q9Y4H4 160 aa7.24□□□□□ -1.25
DDB1-219ENST00000541513 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
DDB1-219ENST00000541513 CCDC102BQ68D86 513 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 LYPD8Q6UX82 237 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 C11orf96Q7Z7L8 435 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 PCDHGB7Q9Y5F8 929 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 CASKIN1Q8WXD9 1431 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
DDB1-219ENST00000541513 LRRIQ1Q96JM4 1722 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 NUP153P49790 1475 aaKnown RBP7.23□□□□□ -1.25
DDB1-219ENST00000541513 FYCO1Q9BQS8 1478 aa7.23□□□□□ -1.25
DDB1-219ENST00000541513 M0R2N6 131 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 CTSHP09668 335 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 GTF2IP78347 998 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 GRIPAP1Q4V328 841 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 LRP10Q7Z4F1 713 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 PRPF38AQ8NAV1 312 aaKnown RBP7.22□□□□□ -1.25
DDB1-219ENST00000541513 RASGRP4Q8TDF6 673 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 PNMA2Q9UL42 364 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 WWC3Q9ULE0 1092 aa7.22□□□□□ -1.25
DDB1-219ENST00000541513 SFI1A8K8P3 1242 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 C3orf80F5H4A9 247 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 GPR182O15218 404 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 HRO43593 1189 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 FOXD4Q12950 439 aaPredicted RBP7.21□□□□□ -1.26
DDB1-219ENST00000541513 RETREG3Q86VR2 466 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 TPCN2Q8NHX9 752 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 FBF1Q8TES7 1133 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 IER2Q9BTL4 223 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 ADAM33Q9BZ11 813 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 COMMD10Q9Y6G5 202 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 RPS6KL1Q9Y6S9 549 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 ATP10BO94823 1461 aa7.21□□□□□ -1.26
DDB1-219ENST00000541513 KIF13AQ9H1H9 1805 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 VPS8Q8N3P4 1428 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 CCDC18Q5T9S5 1454 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 CDC45O75419 566 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 MPSTP25325 297 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 EVA1CP58658 441 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 HS2ST1Q7LGA3 356 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 KIAA0907Q7Z7F0 614 aaPredicted RBP7.2□□□□□ -1.26
DDB1-219ENST00000541513 TATDN2Q93075 761 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 C12orf49Q9H741 205 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 AK5Q9Y6K8 562 aa7.2□□□□□ -1.26
DDB1-219ENST00000541513 EPRSP07814 1512 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms