RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 C1orf141Q5JVX7 400 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 ZNF530Q6P9A1 599 aaPredicted RBP6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 SEPT12Q8IYM1 358 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 LTN1O94822 1766 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 MAP3K5Q99683 1374 aa6.56□□□□□ -1.36
SPARCL1-209ENST00000541496 ZNF521Q96K83 1311 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 TRIM6-TRIM34B2RNG4 842 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 BHMG1C9JSJ3 638 aaPredicted RBP6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 RIPK4P57078 832 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 TSR1Q2NL82 804 aaKnown RBP6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 LAPTM4BQ86VI4 370 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 DCAF5Q96JK2 942 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 GLI3P10071 1580 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 CEMIPQ8WUJ3 1361 aa6.55□□□□□ -1.36
SPARCL1-209ENST00000541496 ERVV-2B6SEH9 535 aa6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 CALD1Q05682 793 aaKnown RBP6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 PDE3BQ13370 1112 aa6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 PACS2Q86VP3 889 aa6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 WWC1Q8IX03 1113 aa6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 MRPL50Q8N5N7 158 aaKnown RBP6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 MARCH10Q8NA82 808 aaPredicted RBP6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 IL17REQ8NFR9 667 aa6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 RTF1Q92541 710 aaKnown RBP6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 MAP2P11137 1827 aaKnown RBP6.54□□□□□ -1.36
SPARCL1-209ENST00000541496 IL16Q14005 1332 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 ZBED9Q6R2W3 1325 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 RGS12O14924 1447 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 THSD7AQ9UPZ6 1657 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 RNMTO43148 476 aaKnown RBP6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 PRIM1P49642 420 aaKnown RBP6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 PRSS12P56730 875 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 KRT27Q7Z3Y8 459 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 WDR63Q8IWG1 891 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 DDX54Q8TDD1 881 aaKnown RBP6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 BABAM1Q9NWV8 329 aa6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 RRP7AQ9Y3A4 280 aaKnown RBP6.53□□□□□ -1.36
SPARCL1-209ENST00000541496 KDM6AO15550 1401 aaPredicted RBP6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 A0A0G2JS52 829 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 GOLGA8CPA6NN73 597 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 ZNF853P0CG23 659 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 PTPN5P54829 565 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 MYT1Q01538 1121 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 NEUROD2Q15784 382 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 PROX2Q3B8N5 592 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 FAM196AQ6ZSG2 479 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 CDCA7LQ96GN5 454 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 LGR6Q9HBX8 967 aa6.52□□□□□ -1.37
SPARCL1-209ENST00000541496 NBPF26B4DH59 902 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 CHL1O00533 1208 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 TAF7Q15545 349 aaPredicted RBP6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 MCM10Q7L590 875 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 CDHR5Q9HBB8 845 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 IFT57Q9NWB7 429 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 KIAA1468Q9P260 1216 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 MRC1P22897 1456 aa6.51□□□□□ -1.37
SPARCL1-209ENST00000541496 LRRC37A3O60309 1634 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 E9PSI1 815 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 CABP4P57796 275 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 TEFQ10587 303 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 PTGDRQ13258 359 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 DCTN1Q14203 1278 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 THUMPD2Q9BTF0 503 aaKnown RBP6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 PKD1L3Q7Z443 1732 aa6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 PARP4Q9UKK3 1724 aaKnown RBP6.5□□□□□ -1.37
SPARCL1-209ENST00000541496 GNAI1P63096 354 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 SLFN5Q08AF3 891 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 TRMT2AQ8IZ69 625 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 NFATC2IPQ8NCF5 419 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 PIGBQ92521 554 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 MYH16Q9H6N6 1097 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 NPDC1Q9NQX5 325 aaPredicted RBP6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 TMOD3Q9NYL9 352 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 TSKSQ9UJT2 592 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 ADAMTS7Q9UKP4 1686 aa6.49□□□□□ -1.37
SPARCL1-209ENST00000541496 BTBD11A6QL63 1104 aa6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 ZNF790Q6PG37 636 aa6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 TTC13Q8NBP0 860 aa6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 ANKK1Q8NFD2 765 aa6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 SALL2Q9Y467 1007 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 RGPD5Q99666 1765 aa6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 SOS1Q07889 1333 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 FANCIQ9NVI1 1328 aa6.48□□□□□ -1.37
SPARCL1-209ENST00000541496 HEG1Q9ULI3 1381 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 KCNQ2O43526 872 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 HOXB7P09629 217 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 CT47B1P0C2W7 299 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 EIF4A1P60842 406 aaKnown RBP6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 HIC1Q14526 733 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 FAM182BQ5T319 152 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 DUSP27Q5VZP5 1158 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 WNT2BQ93097 391 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 ACSBG1Q96GR2 724 aa6.47□□□□□ -1.37
SPARCL1-209ENST00000541496 MBIPQ9NS73 344 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms